RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 COPAP53621 1224 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 MRPS35P82673 323 aaKnown RBP12.54□□□□□ -0.4
RFC5-201ENST00000392542 COG7P83436 770 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 CDH17Q12864 832 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 DLG2Q15700 870 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 C1orf146Q5VVC0 180 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 NAPEPLDQ6IQ20 393 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 DCLRE1AQ6PJP8 1040 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 KLHDC8BQ8IXV7 354 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 ZSCAN18Q8TBC5 510 aaPredicted RBP12.54□□□□□ -0.4
RFC5-201ENST00000392542 SREK1Q8WXA9 508 aaKnown RBP12.54□□□□□ -0.4
RFC5-201ENST00000392542 RHOBTB2Q9BYZ6 727 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 CDH19Q9H159 772 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 CHRAC1Q9NRG0 131 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 SUFUQ9UMX1 484 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 LRCH1Q9Y2L9 728 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 CASTOR2A6NHX0 329 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 H2AFYO75367 372 aaKnown RBP12.54□□□□□ -0.4
RFC5-201ENST00000392542 HSPA4LO95757 839 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 SKIP12755 728 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 TPH1P17752 444 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 DNAJB2P25686 324 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 NMBRP28336 390 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 RPL9P32969 192 aaKnown RBP12.54□□□□□ -0.4
RFC5-201ENST00000392542 SLC25A3Q00325 362 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 VWA5B1Q5TIE3 1220 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 IRGCQ6NXR0 463 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 POU5F2Q8N7G0 328 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 FAM136AQ96C01 138 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 CELF6Q96J87 481 aaKnown RBP12.54□□□□□ -0.4
RFC5-201ENST00000392542 VPS39Q96JC1 886 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 TSGA13Q96PP4 275 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 RTP3Q9BQQ7 232 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 CHST12Q9NRB3 414 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 NSMCE4AQ9NXX6 385 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 MID2Q9UJV3 735 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 GIT1Q9Y2X7 761 aa12.54□□□□□ -0.4
RFC5-201ENST00000392542 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.54□□□□□ -0.4
RFC5-201ENST00000392542 FNDC1Q4ZHG4 1894 aaPredicted RBP12.53□□□□□ -0.4
RFC5-201ENST00000392542 ARL5CA6NH57 179 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 MAP3K7O43318 606 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 CACNG3O60359 315 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 PDHA1P08559 390 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 ANPEPP15144 967 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 HADHAP40939 763 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 AP2B1P63010 937 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 ZNF33AQ06730 810 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 KLC1Q07866 573 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 TIGD5Q53EQ6 642 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 CAPRIN2Q6IMN6 1127 aaKnown RBP12.53□□□□□ -0.4
RFC5-201ENST00000392542 EPGNQ6UW88 154 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 NAPRTQ6XQN6 538 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 AGMOQ6ZNB7 445 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 LINC00523Q86TU6 105 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 ZNF781Q8N8C0 355 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 C2orf69Q8N8R5 385 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 DQX1Q8TE96 717 aaKnown RBP12.53□□□□□ -0.4
RFC5-201ENST00000392542 KIFC1Q9BW19 673 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 OXCT2Q9BYC2 517 aaPredicted RBP12.53□□□□□ -0.4
RFC5-201ENST00000392542 OSBPL2Q9H1P3 480 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 NMRAL1Q9HBL8 299 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 UBP1Q9NZI7 540 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 DNAJB4Q9UDY4 337 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 EIF4E1BA6NMX2 242 aaKnown RBP12.53□□□□□ -0.4
RFC5-201ENST00000392542 TRIM13O60858 407 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 FKBP6O75344 327 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 APOA4P06727 396 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 ODC1P11926 461 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 CYP2C18P33260 490 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 CSRP3P50461 194 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 USP4Q13107 963 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 UPP1Q16831 310 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 ANO4Q32M45 955 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 TMCO4Q5TGY1 634 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 SCML4Q8N228 414 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 CNTD1Q8N815 330 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 ACVR1CQ8NER5 493 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 USP33Q8TEY7 942 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 RNF34Q969K3 372 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 CMTM5Q96DZ9 223 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 GPR22Q99680 433 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 PAAF1Q9BRP4 392 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 COG4Q9H9E3 785 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 ANKRD6Q9Y2G4 727 aa12.53□□□□□ -0.4
RFC5-201ENST00000392542 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.52□□□□□ -0.4
RFC5-201ENST00000392542 CCNT2O60583 730 aaKnown RBP12.52□□□□□ -0.4
RFC5-201ENST00000392542 NCF2P19878 526 aaPredicted RBP12.52□□□□□ -0.4
RFC5-201ENST00000392542 BDNFP23560 247 aa12.52□□□□□ -0.4
RFC5-201ENST00000392542 PRDX6P30041 224 aa12.52□□□□□ -0.4
RFC5-201ENST00000392542 GRM3Q14832 879 aa12.52□□□□□ -0.4
RFC5-201ENST00000392542 CFAP157Q5JU67 520 aa12.52□□□□□ -0.4
RFC5-201ENST00000392542 FAM171BQ6P995 826 aa12.52□□□□□ -0.4
RFC5-201ENST00000392542 OTOP3Q7RTS5 596 aa12.52□□□□□ -0.4
RFC5-201ENST00000392542 ACBD6Q9BR61 282 aa12.52□□□□□ -0.4
RFC5-201ENST00000392542 NEU3Q9UQ49 428 aa12.52□□□□□ -0.4
RFC5-201ENST00000392542 MYADML2A6NDP7 307 aa12.52□□□□□ -0.41
RFC5-201ENST00000392542 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.52□□□□□ -0.41
RFC5-201ENST00000392542 IGLV3-25P01717 112 aa12.52□□□□□ -0.41
RFC5-201ENST00000392542 CTSHP09668 335 aa12.52□□□□□ -0.41
RFC5-201ENST00000392542 SRGAP2BP0DMP2 458 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms