RNA–Protein interactions for RNA: ENST00000392244.7

SUMO1-201, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 2 BASIC

Gene SUMO1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-201ENST00000392244 PBKQ96KB5 322 aa17■□□□□ 0.31
SUMO1-201ENST00000392244 COL25A1Q9BXS0 654 aaPredicted RBP17■□□□□ 0.31
SUMO1-201ENST00000392244 MFSD1Q9H3U5 465 aa17■□□□□ 0.31
SUMO1-201ENST00000392244 DTLQ9NZJ0 730 aa17■□□□□ 0.31
SUMO1-201ENST00000392244 VPS51Q9UID3 782 aa17■□□□□ 0.31
SUMO1-201ENST00000392244 HPCAL4Q9UM19 191 aa17■□□□□ 0.31
SUMO1-201ENST00000392244 SNX12Q9UMY4 172 aa17■□□□□ 0.31
SUMO1-201ENST00000392244 MTF2Q9Y483 593 aaPredicted RBP17■□□□□ 0.31
SUMO1-201ENST00000392244 SHROOM3Q8TF72 1996 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 BDP1A6H8Y1 2624 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 ZSCAN5CA6NGD5 496 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-201ENST00000392244 APOC4-APOC2K7ER74 178 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 CES2O00748 559 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 NPC1O15118 1278 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 FANCGO15287 622 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 NCAM2O15394 837 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 SNAP91O60641 907 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 ZMPSTE24O75844 475 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 APOC2P02655 101 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 SRPRAP08240 638 aaKnown RBP16.99■□□□□ 0.31
SUMO1-201ENST00000392244 HNRNPLP14866 589 aaKnown RBP eCLIP16.99■□□□□ 0.31
SUMO1-201ENST00000392244 PRLRP16471 622 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 MX2P20592 715 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 GLDCP23378 1020 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 CXCR5P32302 372 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 MRPS21P82921 87 aaKnown RBP16.99■□□□□ 0.31
SUMO1-201ENST00000392244 ARF5P84085 180 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 SLC10A2Q12908 348 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-201ENST00000392244 KLF1Q13351 362 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-201ENST00000392244 FZD5Q13467 585 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 PAPD7Q5XG87 772 aaKnown RBP16.99■□□□□ 0.31
SUMO1-201ENST00000392244 CWF19L1Q69YN2 538 aaKnown RBP16.99■□□□□ 0.31
SUMO1-201ENST00000392244 RETSATQ6NUM9 610 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 BZW1Q7L1Q6 419 aaKnown RBP16.99■□□□□ 0.31
SUMO1-201ENST00000392244 SLC13A5Q86YT5 568 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-201ENST00000392244 TP53INP2Q8IXH6 220 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 CCDC105Q8IYK2 499 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 KDM1BQ8NB78 822 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 NETO2Q8NC67 525 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 C16orf45Q96MC5 204 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-201ENST00000392244 OLFM3Q96PB7 478 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 OSBPL9Q96SU4 736 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 THAP10Q9P2Z0 257 aaPredicted RBP16.99■□□□□ 0.31
SUMO1-201ENST00000392244 SLC25A13Q9UJS0 675 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 HCN2Q9UL51 889 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 ERVW-1Q9UQF0 538 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 HEY1Q9Y5J3 304 aa16.99■□□□□ 0.31
SUMO1-201ENST00000392244 CBX4O00257 560 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 STK25O00506 426 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 RNF40O75150 1001 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 TUBB4AP04350 444 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 PECAM1P16284 738 aaPredicted RBP16.98■□□□□ 0.31
SUMO1-201ENST00000392244 TCP1P17987 556 aaKnown RBP16.98■□□□□ 0.31
SUMO1-201ENST00000392244 GARSP41250 739 aaKnown RBP16.98■□□□□ 0.31
SUMO1-201ENST00000392244 CTSOP43234 321 aaPredicted RBP16.98■□□□□ 0.31
SUMO1-201ENST00000392244 NUMBP49757 651 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 SEC13P55735 322 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 GEMIN4P57678 1058 aaKnown RBP16.98■□□□□ 0.31
SUMO1-201ENST00000392244 PTPRNQ16849 979 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 HSF5Q4G112 596 aaPredicted RBP16.98■□□□□ 0.31
SUMO1-201ENST00000392244 EGFLAMQ63HQ2 1017 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 NPNTQ6UXI9 565 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 ZNF354CQ86Y25 554 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 ATPAF2Q8N5M1 289 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 ZNF513Q8N8E2 541 aaPredicted RBP16.98■□□□□ 0.31
SUMO1-201ENST00000392244 FLCNQ8NFG4 579 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 USP33Q8TEY7 942 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 CYB5D2Q8WUJ1 264 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 SORCS1Q8WY21 1168 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 P3H4Q92791 437 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 CLDN23Q96B33 292 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 HDAC11Q96DB2 347 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 MRGPRX3Q96LB0 322 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 LMAN1LQ9HAT1 526 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 PDFQ9HBH1 243 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 RBM12Q9NTZ6 932 aaKnown RBP16.98■□□□□ 0.31
SUMO1-201ENST00000392244 PLA2G4CQ9UP65 541 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 HS3ST2Q9Y278 367 aa16.98■□□□□ 0.31
SUMO1-201ENST00000392244 KIF2AO00139 706 aaPredicted RBP16.97■□□□□ 0.31
SUMO1-201ENST00000392244 CEP104O60308 925 aa16.97■□□□□ 0.31
SUMO1-201ENST00000392244 PRAMEF11O60813 436 aa16.97■□□□□ 0.31
SUMO1-201ENST00000392244 MAP3K6O95382 1288 aa16.97■□□□□ 0.31
SUMO1-201ENST00000392244 PDGFBP01127 241 aaPredicted RBP16.97■□□□□ 0.31
SUMO1-201ENST00000392244 CASQ1P31415 396 aa16.97■□□□□ 0.31
SUMO1-201ENST00000392244 TIE1P35590 1138 aa16.97■□□□□ 0.31
SUMO1-201ENST00000392244 RPS9P46781 194 aaKnown RBP16.97■□□□□ 0.31
SUMO1-201ENST00000392244 IL10RBQ08334 325 aa16.97■□□□□ 0.31
SUMO1-201ENST00000392244 SLC20A2Q08357 652 aa16.97■□□□□ 0.31
SUMO1-201ENST00000392244 ENPP2Q13822 863 aa16.97■□□□□ 0.31
SUMO1-201ENST00000392244 ZNF234Q14588 700 aa16.97■□□□□ 0.31
SUMO1-201ENST00000392244 CCDC181Q5TID7 509 aa16.97■□□□□ 0.31
SUMO1-201ENST00000392244 EMC10Q5UCC4 262 aa16.97■□□□□ 0.31
SUMO1-201ENST00000392244 SYT10Q6XYQ8 523 aa16.97■□□□□ 0.31
SUMO1-201ENST00000392244 ARHGAP36Q6ZRI8 547 aa16.97■□□□□ 0.31
SUMO1-201ENST00000392244 TRMT11Q7Z4G4 463 aaKnown RBP16.97■□□□□ 0.31
SUMO1-201ENST00000392244 RASGEF1CQ8N431 466 aa16.97■□□□□ 0.31
SUMO1-201ENST00000392244 TTC13Q8NBP0 860 aa16.97■□□□□ 0.31
SUMO1-201ENST00000392244 MYO19Q96H55 970 aa16.97■□□□□ 0.31
SUMO1-201ENST00000392244 TSGA13Q96PP4 275 aa16.97■□□□□ 0.31
SUMO1-201ENST00000392244 BRD8Q9H0E9 1235 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms