RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 GCNAQ96QF7 691 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 SNX18Q96RF0 628 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 CITED1Q99966 193 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 WDR77Q9BQA1 342 aaPredicted RBP1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 ZPBPQ9BS86 351 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 NDC1Q9BTX1 674 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 MMTAG2Q9BU76 263 aaKnown RBP1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 OSBPL1AQ9BXW6 950 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 GPR62Q9BZJ7 368 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 LRRN3Q9H3W5 708 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 BEX1Q9HBH7 125 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 PLAC1Q9HBJ0 212 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 SENP2Q9HC62 589 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 TCF7L1Q9HCS4 588 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 TDP1Q9NUW8 608 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 KLHL11Q9NVR0 708 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 GULP1Q9UBP9 304 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 TMEFF2Q9UIK5 374 aaPredicted RBP1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 SERPINB13Q9UIV8 391 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 FEM1BQ9UK73 627 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 HCN2Q9UL51 889 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 HDAC5Q9UQL6 1122 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 RNF6Q9Y252 685 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 NCKAP1Q9Y2A7 1128 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 CHMP3Q9Y3E7 222 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 NPFFR2Q9Y5X5 522 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 RAD54BQ9Y620 910 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 U3KQA8 63 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 DNAH10Q8IVF4 4471 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 PTPRDP23468 1912 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 PLXND1Q9Y4D7 1925 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 FAT1Q14517 4588 aa1.12□□□□□ -2.23
RNU6-42P-201ENST00000384165 FAT3Q8TDW7 4589 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 MUC5BQ9HC84 5762 aaPredicted RBP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 SORL1Q92673 2214 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 A0A1W2PR77 199 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 MBLAC1A4D2B0 266 aaPredicted RBP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 USP27XA6NNY8 438 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 FAM229AH3BQW9 127 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 ADAM12O43184 909 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 ALOX12BO75342 701 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 DAB1O75553 588 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 DEDDO75618 318 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 EIF3JO75822 258 aaKnown RBP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 PIAS2O75928 621 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 NEBLO76041 1014 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 RHOBTB3O94955 611 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 PRAMEF12O95522 483 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 TSPAN12O95859 305 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 BCL10O95999 233 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 IGLV3-19P01714 112 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 CELA2AP08217 269 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 PARP1P09874 1014 aaKnown RBP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 IFIT1P09914 478 aaKnown RBP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 IGHV4-31P0DP07 118 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 MYBL2P10244 700 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 PAX1P15863 534 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 ABOP16442 354 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 C5AR1P21730 350 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 PRPH2P23942 346 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 GUCY1A2P33402 732 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 TDGF1P3P51864 188 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 HNRNPA3P51991 378 aaKnown RBP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 VAV2P52735 878 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 ZNF132P52740 706 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 ARFIP2P53365 341 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 SLC5A3P53794 718 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 EPHB3P54753 998 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 ARPP19P56211 112 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 HNRNPKP61978 463 aaKnown RBP eCLIP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 PPP2CBP62714 309 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 RPS15P62841 145 aaKnown RBP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 PPP2CAP67775 309 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 LSM11P83369 360 aaKnown RBP eCLIP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 LOXL1Q08397 574 aaPredicted RBP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 TWF1Q12792 350 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 IKQ13123 557 aaPredicted RBP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 NR5A1Q13285 461 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 DMP1Q13316 513 aaPredicted RBP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 KLF1Q13351 362 aaPredicted RBP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 DRAP1Q14919 205 aaPredicted RBP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 SPCS2Q15005 226 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 SETDB1Q15047 1291 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 RNPS1Q15287 305 aaKnown RBP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 ZNHIT3Q15649 155 aaPredicted RBP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 FUT11Q495W5 492 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 MTERF2Q49AM1 385 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 KRTCAP3Q53RY4 240 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 PRRT3Q5FWE3 981 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 TCTEX1D4Q5JR98 221 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 RALGPS1Q5JS13 557 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 Q5VSD8 79 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 TTC39BQ5VTQ0 682 aaPredicted RBP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 FAM171A1Q5VUB5 890 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 FOXD4L5Q5VV16 416 aaPredicted RBP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 BTBD8Q5XKL5 378 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 ANKS6Q68DC2 871 aa1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 ZNF324BQ6AW86 544 aaPredicted RBP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 TIGD7Q6NT04 549 aaPredicted RBP1.11□□□□□ -2.23
RNU6-42P-201ENST00000384165 FIGLAQ6QHK4 219 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms