RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 GPS1Q13098 491 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 ATP1A4Q13733 1029 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 KLHDC7AQ5VTJ3 777 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 ERICH5Q6P6B1 374 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 ZBTB49Q6ZSB9 765 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 TRIM67Q6ZTA4 783 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 RRM2BQ7LG56 351 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 NIPA1Q7RTP0 329 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 DHFR2Q86XF0 187 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 PGAM4Q8N0Y7 254 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 CLEC4FQ8N1N0 589 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 PPHLN1Q8NEY8 458 aaKnown RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 ART5Q96L15 291 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 PAK6Q9NQU5 681 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 SPATA7Q9P0W8 599 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 CLCA2Q9UQC9 943 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 IGSF9BQ9UPX0 1349 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 H6PDO95479 791 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 FADS2O95864 444 aaKnown RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 YES1P07947 543 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 SLC2A3P11169 496 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 YWHAHQ04917 246 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 IL23RQ5VWK5 629 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 NAPEPLDQ6IQ20 393 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 SWSAP1Q6NVH7 229 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 GLYCTKQ8IVS8 523 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 MIER2Q8N344 545 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 ACTRT2Q8TDY3 377 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 FAM151AQ8WW52 585 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 AP2M1Q96CW1 435 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 ZNF333Q96JL9 665 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 FAM213AQ9BRX8 229 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 TLR10Q9BXR5 811 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 BRD9Q9H8M2 597 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 DBR1Q9UK59 544 aaKnown RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 SCN9AQ15858 1988 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 RRN3P2A6NIE6 340 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 IL6P05231 212 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 CES1P23141 567 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 CSTF2P33240 577 aaKnown RBP eCLIP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 PTGS2P35354 604 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 TTMPQ5BVD1 217 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 LDHDQ86WU2 507 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 TCAIMQ8N3R3 496 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 TRPV1Q8NER1 839 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 PIWIL2Q8TC59 973 aaKnown RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 RASGRP4Q8TDF6 673 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 DCUN1D1Q96GG9 259 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 HNRNPABQ99729 332 aaKnown RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 PFDN2Q9UHV9 154 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 PCDHA3Q9Y5H8 950 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 ZNF831Q5JPB2 1677 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 CACNA1CQ13936 2221 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 SDR42E2A6NKP2 422 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 PLD1Q13393 1074 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 PTPROQ16827 1216 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 PLEKHG6Q3KR16 790 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 EPC2Q52LR7 807 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 EFHC2Q5JST6 749 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 USP43Q70EL4 1123 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 CYP4Z1Q86W10 505 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 EID3Q8N140 333 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 PQLC1Q8N2U9 271 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 KIF12Q96FN5 646 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 TMEM120AQ9BXJ8 343 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 CALN1Q9BXU9 219 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 NPHS2Q9NP85 383 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 CYLDQ9NQC7 956 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 INTS10Q9NVR2 710 aaKnown RBP4.95□□□□□ -1.62
PTPRD-203ENST00000381196 DAGLAQ9Y4D2 1042 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 COL5A2P05997 1499 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-203ENST00000381196 ABCA3Q99758 1704 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 NWD2Q9ULI1 1742 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 EP300Q09472 2414 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-203ENST00000381196 TRIM38O00635 465 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 AP1G1O43747 822 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 ORC5O43913 435 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 EDF1O60869 148 aaKnown RBP4.95□□□□□ -1.62
PTPRD-203ENST00000381196 AVILO75366 819 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 FBXO21O94952 628 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 RFC5P40937 340 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 DDR2Q16832 855 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 PLA2G4FQ68DD2 849 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 HEATR6Q6AI08 1181 aaKnown RBP4.95□□□□□ -1.62
PTPRD-203ENST00000381196 CACTIN-AS1Q8N1I8 211 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 ZFYVE19Q96K21 471 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 SH2D3AQ9BRG2 576 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 GOLPH3Q9H4A6 298 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 MAN1C1Q9NR34 630 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 CPA4Q9UI42 421 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 SIX4Q9UIU6 781 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 RBBP6Q7Z6E9 1792 aaKnown RBP4.95□□□□□ -1.62
PTPRD-203ENST00000381196 POC1B-GALNT4F8VUJ3 575 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 CHST10O43529 356 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 CLPXO76031 633 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 LARGE1O95461 756 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 FTCDO95954 541 aa4.95□□□□□ -1.62
PTPRD-203ENST00000381196 NCF1P14598 390 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-203ENST00000381196 SDC2P34741 201 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms