RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 TECTAO75443 2155 aa19.22■□□□□ 0.67
SMN2-202ENST00000380742 CBX4O00257 560 aa19.21■□□□□ 0.67
SMN2-202ENST00000380742 CES2O00748 559 aa19.21■□□□□ 0.67
SMN2-202ENST00000380742 KDELR3O43731 214 aa19.21■□□□□ 0.67
SMN2-202ENST00000380742 CHRM1P11229 460 aaPredicted RBP19.21■□□□□ 0.67
SMN2-202ENST00000380742 ARF5P84085 180 aa19.21■□□□□ 0.67
SMN2-202ENST00000380742 EIF4HQ15056 248 aaKnown RBP19.21■□□□□ 0.67
SMN2-202ENST00000380742 TRIM67Q6ZTA4 783 aa19.21■□□□□ 0.67
SMN2-202ENST00000380742 NUDT18Q6ZVK8 323 aa19.21■□□□□ 0.67
SMN2-202ENST00000380742 ADAT2Q7Z6V5 191 aaKnown RBP19.21■□□□□ 0.67
SMN2-202ENST00000380742 ZNF354CQ86Y25 554 aa19.21■□□□□ 0.67
SMN2-202ENST00000380742 CYB5D2Q8WUJ1 264 aa19.21■□□□□ 0.67
SMN2-202ENST00000380742 P3H4Q92791 437 aa19.21■□□□□ 0.67
SMN2-202ENST00000380742 OLFM3Q96PB7 478 aa19.21■□□□□ 0.67
SMN2-202ENST00000380742 C2orf49Q9BVC5 232 aaPredicted RBP19.21■□□□□ 0.67
SMN2-202ENST00000380742 RBM12Q9NTZ6 932 aaKnown RBP19.21■□□□□ 0.67
SMN2-202ENST00000380742 STARD13Q9Y3M8 1113 aa19.21■□□□□ 0.67
SMN2-202ENST00000380742 SAR1BQ9Y6B6 198 aa19.21■□□□□ 0.67
SMN2-202ENST00000380742 J3KR12 359 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 APOC4-APOC2K7ER74 178 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 TIMM44O43615 452 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 APOC2P02655 101 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 FGGP02679 453 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 CHRNB1P11230 501 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 ALADP13716 330 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 GARSP41250 739 aaKnown RBP19.2■□□□□ 0.66
SMN2-202ENST00000380742 KIR2DL1P43626 348 aaPredicted RBP19.2■□□□□ 0.66
SMN2-202ENST00000380742 NR2C2P49116 596 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 SEC13P55735 322 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 ECT2LQ008S8 904 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 OTUD4Q01804 1114 aaKnown RBP19.2■□□□□ 0.66
SMN2-202ENST00000380742 FZD5Q13467 585 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 UBXN2BQ14CS0 331 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 PTPRNQ16849 979 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 CCDC181Q5TID7 509 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 LINGO4Q6UY18 593 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 ACTL9Q8TC94 416 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 ACDQ96AP0 544 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 RPL10LQ96L21 214 aaKnown RBP19.2■□□□□ 0.66
SMN2-202ENST00000380742 MRGPRX3Q96LB0 322 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 FAM118BQ9BPY3 351 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 ZDHHC4Q9NPG8 344 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 IPO11Q9UI26 975 aaKnown RBP19.2■□□□□ 0.66
SMN2-202ENST00000380742 TTC7AQ9ULT0 858 aaPredicted RBP19.2■□□□□ 0.66
SMN2-202ENST00000380742 ERVW-1Q9UQF0 538 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 R3HDM2Q9Y2K5 976 aaKnown RBP19.2■□□□□ 0.66
SMN2-202ENST00000380742 MRPS17Q9Y2R5 130 aaKnown RBP19.2■□□□□ 0.66
SMN2-202ENST00000380742 ACTL7AQ9Y615 435 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 RAD54BQ9Y620 910 aa19.2■□□□□ 0.66
SMN2-202ENST00000380742 FAM170BA6NMN3 283 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 MAFKO60675 156 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 SLC34A2O95436 690 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 CD160O95971 181 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 MT-CO1P00395 513 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 PDGFBP01127 241 aaPredicted RBP19.19■□□□□ 0.66
SMN2-202ENST00000380742 TUBB4AP04350 444 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 ATP5BP06576 529 aaKnown RBP19.19■□□□□ 0.66
SMN2-202ENST00000380742 DLDP09622 509 aaKnown RBP19.19■□□□□ 0.66
SMN2-202ENST00000380742 STK19P49842 368 aaPredicted RBP19.19■□□□□ 0.66
SMN2-202ENST00000380742 SULT2A1Q06520 285 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 NOMO1Q15155 1222 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 SIX1Q15475 284 aaPredicted RBP19.19■□□□□ 0.66
SMN2-202ENST00000380742 EGFLAMQ63HQ2 1017 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 LEKR1Q6ZMV7 388 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 ATPAF2Q8N5M1 289 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 MYO19Q96H55 970 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 NELL2Q99435 816 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 PDFQ9HBH1 243 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 SMARCAL1Q9NZC9 954 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 HPCAL4Q9UM19 191 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 KIF2AO00139 706 aaPredicted RBP19.19■□□□□ 0.66
SMN2-202ENST00000380742 PRAMEF11O60813 436 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 ASLP04424 464 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 MX2P20592 715 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 TIE1P35590 1138 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 PDK1Q15118 436 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 LONRF2Q1L5Z9 754 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 B4GALNT4Q76KP1 1039 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 LRRC49Q8IUZ0 686 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 ACTRT1Q8TDG2 376 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 UCMAQ8WVF2 138 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 HDAC11Q96DB2 347 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 ACOX2Q99424 681 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 LGMNQ99538 433 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 LMAN1LQ9HAT1 526 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 THAP10Q9P2Z0 257 aaPredicted RBP19.19■□□□□ 0.66
SMN2-202ENST00000380742 SLCO3A1Q9UIG8 710 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 SLC25A13Q9UJS0 675 aa19.19■□□□□ 0.66
SMN2-202ENST00000380742 ESPNB1AK53 854 aa19.18■□□□□ 0.66
SMN2-202ENST00000380742 STK25O00506 426 aa19.18■□□□□ 0.66
SMN2-202ENST00000380742 NCAM2O15394 837 aa19.18■□□□□ 0.66
SMN2-202ENST00000380742 RNF40O75150 1001 aa19.18■□□□□ 0.66
SMN2-202ENST00000380742 SRPRAP08240 638 aaKnown RBP19.18■□□□□ 0.66
SMN2-202ENST00000380742 HNRNPLP14866 589 aaKnown RBP eCLIP19.18■□□□□ 0.66
SMN2-202ENST00000380742 IL10RBQ08334 325 aa19.18■□□□□ 0.66
SMN2-202ENST00000380742 PPIDQ08752 370 aaKnown RBP19.18■□□□□ 0.66
SMN2-202ENST00000380742 ZNF234Q14588 700 aa19.18■□□□□ 0.66
SMN2-202ENST00000380742 FBXO43Q4G163 708 aa19.18■□□□□ 0.66
SMN2-202ENST00000380742 C2orf27AQ580R0 203 aa19.18■□□□□ 0.66
SMN2-202ENST00000380742 DGKKQ5KSL6 1271 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms