RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 HDAC11Q96DB2 347 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 VPS39Q96JC1 886 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 MLPHQ9BV36 600 aaPredicted RBP16.64■□□□□ 0.25
VPS16-203ENST00000380469 CHRAC1Q9NRG0 131 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 OXSMQ9NWU1 459 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 DDIT4Q9NX09 232 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 ZDHHC7Q9NXF8 308 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 NSMCE4AQ9NXX6 385 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 SLC39A10Q9ULF5 831 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 ANKRD6Q9Y2G4 727 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 MBLAC1A4D2B0 266 aaPredicted RBP16.63■□□□□ 0.25
VPS16-203ENST00000380469 YJEFN3A6XGL0 299 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 ZMPSTE24O75844 475 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 SORBS2O94875 1100 aaKnown RBP16.63■□□□□ 0.25
VPS16-203ENST00000380469 F7P08709 466 aaPredicted RBP16.63■□□□□ 0.25
VPS16-203ENST00000380469 THRAP10827 490 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 NFKB1P19838 968 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 PAPOLAP51003 745 aaKnown RBP16.63■□□□□ 0.25
VPS16-203ENST00000380469 DAOAP59103 153 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 PEX6Q13608 980 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 LRRC36Q1X8D7 754 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 ANO4Q32M45 955 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 TCHHL1Q5QJ38 904 aaPredicted RBP16.63■□□□□ 0.25
VPS16-203ENST00000380469 HIPK4Q8NE63 616 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 RDH11Q8TC12 318 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 AGR3Q8TD06 166 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 GDPD5Q8WTR4 605 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 TMEM40Q8WWA1 233 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 EPAS1Q99814 870 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 DDX50Q9BQ39 737 aaKnown RBP16.63■□□□□ 0.25
VPS16-203ENST00000380469 APOL2Q9BQE5 337 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 CCDC28BQ9BUN5 200 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 GATA5Q9BWX5 397 aaPredicted RBP16.63■□□□□ 0.25
VPS16-203ENST00000380469 TASP1Q9H6P5 420 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 CPSF2Q9P2I0 782 aaKnown RBP16.63■□□□□ 0.25
VPS16-203ENST00000380469 UNCXA6NJT0 531 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.63■□□□□ 0.25
VPS16-203ENST00000380469 C9IYK1 514 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 GABRDO14764 452 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 KIF3CO14782 793 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 MAP3K13O43283 966 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 TPH1P17752 444 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 LRPAP1P30533 357 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 GJA9P57773 515 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 R3HDM1Q15032 1099 aaKnown RBP16.63■□□□□ 0.25
VPS16-203ENST00000380469 THEMIS2Q5TEJ8 643 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 NPWQ8N729 165 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 PHC3Q8NDX5 983 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 EBF3Q9H4W6 596 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 ANLNQ9NQW6 1124 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 CNGB3Q9NQW8 809 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 ADAMTS6Q9UKP5 1117 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 SSX2IPQ9Y2D8 614 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 RAP2CQ9Y3L5 183 aa16.63■□□□□ 0.25
VPS16-203ENST00000380469 PSMD3O43242 534 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 AP1G2O75843 785 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 F9P00740 461 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 GLDCP23378 1020 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 ZNF135P52742 658 aaPredicted RBP16.62■□□□□ 0.25
VPS16-203ENST00000380469 HK2P52789 917 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 PRKAA2P54646 552 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 MTTPP55157 894 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 GALNT2Q10471 571 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 CDH17Q12864 832 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 ZBTB17Q13105 803 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 MAP3K21Q5TCX8 1036 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 LPCAT4Q643R3 524 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 NAPEPLDQ6IQ20 393 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 ACAD11Q709F0 780 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 GPR142Q7Z601 462 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 ARRDC4Q8NCT1 418 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 MAPK15Q8TD08 544 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 LENG8Q96PV6 779 aaPredicted RBP16.62■□□□□ 0.25
VPS16-203ENST00000380469 OR52B2Q96RD2 323 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 ACE2Q9BYF1 805 aaPredicted RBP16.62■□□□□ 0.25
VPS16-203ENST00000380469 WDCPQ9H6R7 721 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 RRN3Q9NYV6 651 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 F2P00734 622 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 LTFP02788 710 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 USP17L7P0C7H9 530 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 RAG1P15918 1043 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 YBX3P16989 372 aaKnown RBP eCLIP16.62■□□□□ 0.25
VPS16-203ENST00000380469 SERPINB5P36952 375 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 RPL14P50914 215 aaKnown RBP16.62■□□□□ 0.25
VPS16-203ENST00000380469 RABGGTBP53611 331 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 MED21Q13503 144 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 MFSD10Q14728 455 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 LIPMQ5VYY2 423 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 SEL1L3Q68CR1 1132 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 ZYG11AQ6WRX3 759 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 LINC00523Q86TU6 105 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 EFCAB3Q8N7B9 438 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 SMG8Q8ND04 991 aaKnown RBP16.62■□□□□ 0.25
VPS16-203ENST00000380469 PGAP3Q96FM1 320 aaPredicted RBP16.62■□□□□ 0.25
VPS16-203ENST00000380469 SCYL1Q96KG9 808 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 TEKT5Q96M29 485 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 TUBGCP5Q96RT8 1024 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 SERPINI1Q99574 410 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 COLEC11Q9BWP8 271 aa16.62■□□□□ 0.25
VPS16-203ENST00000380469 DRC3Q9H069 523 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms