RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 RAD9AQ99638 391 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 AASSQ9UDR5 926 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 INSL6Q9Y581 213 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 FNDC1Q4ZHG4 1894 aaPredicted RBP7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 IGKV6-21A0A0C4DH24 114 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 FAM72CH0Y354 149 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 PDLIM1O00151 329 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 ERVK-10P10266 1014 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 CD68P34810 354 aaPredicted RBP7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 MLH1P40692 756 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 HTRA4P83105 476 aaPredicted RBP7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 BTG3Q14201 252 aaPredicted RBP7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 KYAT1Q16773 422 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 FAM72AQ5TYM5 149 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 OTUD1Q5VV17 481 aaPredicted RBP7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 C1orf146Q5VVC0 180 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 FAM72DQ6L9T8 149 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 DHDDSQ86SQ9 333 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 FAM72BQ86X60 149 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 PHF13Q86YI8 300 aaPredicted RBP7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 GALNT4Q8N4A0 578 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 LRRC71Q8N4P6 559 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 MCPH1Q8NEM0 835 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 CNBD2Q96M20 576 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 NTPCRQ9BSD7 190 aaKnown RBP7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 OSBPL2Q9H1P3 480 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 C2orf40Q9H1Z8 148 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 COPS7BQ9H9Q2 264 aaPredicted RBP7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 DNAJC16Q9Y2G8 782 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 PCDHB2Q9Y5E7 798 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 GOLGA4Q13439 2230 aaKnown RBP7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 G3V2L1 256 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 APRTP07741 180 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 KCNC1P48547 511 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 GCNT1Q02742 428 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 APOFQ13790 326 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 AMHR2Q16671 573 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 HHATQ5VTY9 493 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 TRAF7Q6Q0C0 670 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 XKR5Q6UX68 686 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 TIFAQ96CG3 184 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 APOPT1Q96IL0 206 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 GAS2L1Q99501 681 aaPredicted RBP7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 BRD8Q9H0E9 1235 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 VPS11Q9H270 941 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 PRDM16Q9HAZ2 1276 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 UTS2RQ9UKP6 389 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 LZTS1Q9Y250 596 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 PCDHB4Q9Y5E5 795 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 SVEP1Q4LDE5 3571 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 MAFO75444 373 aaPredicted RBP7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 GJB3O75712 270 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 PIK3R1P27986 724 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 SLC1A1P43005 524 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 PGFP49763 221 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 TARBP2Q15633 366 aaKnown RBP7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 MRPL9Q9BYD2 267 aaKnown RBP7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 GCOM2Q9BZD3 368 aaPredicted RBP7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 LRRC27Q9C0I9 530 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 BLOC1S6Q9UL45 172 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 SNX10Q9Y5X0 201 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 FAM149AA5PLN7 773 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 PAPSS1O43252 624 aaPredicted RBP7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 FUCA1P04066 466 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 ZNF286BP0CG31 522 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 NR4A1P22736 598 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 ANXA13P27216 316 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 SERPINB5P36952 375 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 PTPN9P43378 593 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 SLC18A1P54219 525 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 DSG1Q02413 1049 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 ZNF789Q5FWF6 425 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 IL23RQ5VWK5 629 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 DRG1Q9Y295 367 aaKnown RBP7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 PDCD11Q14690 1871 aaKnown RBP7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 ACOT8O14734 319 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 TPP1O14773 563 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 ENDOD1O94919 500 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 GAP43P17677 238 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 TNNI1P19237 187 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 NSFP46459 744 aaKnown RBP7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 RGS7P49802 495 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 ASPHQ12797 758 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 CAPSQ13938 189 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 MORF4L2Q15014 288 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 SHHQ15465 462 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 KCTD21Q4G0X4 260 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 NAPEPLDQ6IQ20 393 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 PPP1R2P3Q6NXS1 205 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 HERC6Q8IVU3 1022 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 SCUBE3Q8IX30 993 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 BMPERQ8N8U9 685 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 CCDC89Q8N998 374 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 FEM1CQ96JP0 617 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 NPAS2Q99743 824 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 TRIM4Q9C037 500 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 MMADHCQ9H3L0 296 aaPredicted RBP7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 AVENQ9NQS1 362 aaPredicted RBP7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 NEMP1O14524 444 aa7.51□□□□□ -1.21
GPCPD1-201ENST00000379019 EOMESO95936 686 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms