RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 CXorf57Q6NSI4 855 aaKnown RBP18.28■□□□□ 0.52
PDLIM4-202ENST00000379018 OR4C6Q8NH72 309 aa18.28■□□□□ 0.52
PDLIM4-202ENST00000379018 KCNE4Q8WWG9 221 aa18.28■□□□□ 0.52
PDLIM4-202ENST00000379018 POPDC2Q9HBU9 364 aa18.28■□□□□ 0.52
PDLIM4-202ENST00000379018 VPS28Q9UK41 221 aa18.28■□□□□ 0.52
PDLIM4-202ENST00000379018 A0A1W2PQU0 124 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 KCNU1A8MYU2 1149 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 ERVH48-1M5A8F1 160 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 KPNA3O00505 521 aaPredicted RBP18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 KLK10O43240 276 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 OPA1O60313 960 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 CSO75390 466 aaKnown RBP18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 GPD2P43304 727 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 CLDN2P57739 230 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 KCNMA1Q12791 1236 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 CETN1Q12798 172 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 LY6DQ14210 128 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 TAF5Q15542 800 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 ISM2Q6H9L7 571 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 FBXL22Q6P050 247 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 OR13H1Q8NG92 308 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 OR52K2Q8NGK3 314 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 ZNF578Q96N58 590 aaPredicted RBP18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 DEPDC7Q96QD5 511 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 TRIM62Q9BVG3 475 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 ABCG4Q9H172 646 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 PREBQ9HCU5 417 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 WDR70Q9NW82 654 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 DDIT4Q9NX09 232 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 VANGL2Q9ULK5 521 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 PPM1HQ9ULR3 514 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 ATMQ13315 3056 aa18.27■□□□□ 0.52
PDLIM4-202ENST00000379018 GRAP2O75791 330 aa18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 NEBLO76041 1014 aa18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 LETM1O95202 739 aaPredicted RBP18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 PCDH8O95206 1070 aa18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 ALPPL2P10696 532 aa18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 AKT2P31751 481 aa18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 TAS2R38P59533 333 aa18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 LRRC63Q05C16 580 aa18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 PIP5KL1Q5T9C9 394 aa18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 OR6B2Q6IFH4 312 aa18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 PTAR1Q7Z6K3 402 aaPredicted RBP18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 CACTIN-AS1Q8N1I8 211 aa18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 FAM131CQ96AQ9 280 aa18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 APOLD1Q96LR9 279 aa18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 NOX5Q96PH1 765 aa18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 PRMT1Q99873 361 aaKnown RBP18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 MUC3BQ9H195 1237 aa18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 METTL14Q9HCE5 456 aaKnown RBP18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 DYRK4Q9NR20 520 aa18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 KLHL11Q9NVR0 708 aa18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 DNAJC28Q9NX36 388 aa18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 ZDHHC9Q9Y397 364 aa18.26■□□□□ 0.51
PDLIM4-202ENST00000379018 COL6A6A6NMZ7 2263 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 MCF2LO15068 1137 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 THAP12O43422 761 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 ATP9BO43861 1147 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 PIAS2O75928 621 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 CTSLP07711 333 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 KRT10P13645 584 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 OXCT1P55809 520 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 YWHAZP63104 245 aaKnown RBP18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 CDK17Q00537 523 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 NME3Q13232 169 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 ZNF177Q13360 481 aaPredicted RBP18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 C3orf38Q5JPI3 329 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 TTC39BQ5VTQ0 682 aaPredicted RBP18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 KLHL10Q6JEL2 608 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 DEFB106AQ8N104 65 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 TMEM145Q8NBT3 493 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 GRIN3AQ8TCU5 1115 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 MAPK15Q8TD08 544 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 ARRDC3Q96B67 414 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 KREMEN1Q96MU8 473 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 FEM1AQ9BSK4 669 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 GTPBP4Q9BZE4 634 aaKnown RBP18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 SEMA4CQ9C0C4 833 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 SCAND2PQ9GZW5 306 aaPredicted RBP18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 ACP6Q9NPH0 428 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 TENM4Q6N022 2769 aa18.25■□□□□ 0.51
PDLIM4-202ENST00000379018 SNAP91O60641 907 aa18.24■□□□□ 0.51
PDLIM4-202ENST00000379018 IGLV3-25P01717 112 aa18.24■□□□□ 0.51
PDLIM4-202ENST00000379018 CKMT1AP12532 417 aa18.24■□□□□ 0.51
PDLIM4-202ENST00000379018 CCR1P32246 355 aa18.24■□□□□ 0.51
PDLIM4-202ENST00000379018 RPL34P49207 117 aaKnown RBP18.24■□□□□ 0.51
PDLIM4-202ENST00000379018 PLK1P53350 603 aa18.24■□□□□ 0.51
PDLIM4-202ENST00000379018 RHDQ02161 417 aa18.24■□□□□ 0.51
PDLIM4-202ENST00000379018 AUHQ13825 339 aaKnown RBP18.24■□□□□ 0.51
PDLIM4-202ENST00000379018 SEL1L3Q68CR1 1132 aa18.24■□□□□ 0.51
PDLIM4-202ENST00000379018 FOXR1Q6PIV2 292 aa18.24■□□□□ 0.51
PDLIM4-202ENST00000379018 HORMAD1Q86X24 394 aa18.24■□□□□ 0.51
PDLIM4-202ENST00000379018 SH2D3CQ8N5H7 860 aa18.24■□□□□ 0.51
PDLIM4-202ENST00000379018 ATP11CQ8NB49 1132 aa18.24■□□□□ 0.51
PDLIM4-202ENST00000379018 LMO3Q8TAP4 145 aa18.24■□□□□ 0.51
PDLIM4-202ENST00000379018 IFI44Q8TCB0 444 aa18.24■□□□□ 0.51
PDLIM4-202ENST00000379018 SMARCE1Q969G3 411 aa18.24■□□□□ 0.51
PDLIM4-202ENST00000379018 VCPIP1Q96JH7 1222 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms