RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 TSGA13Q96PP4 275 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 TRABDQ9H4I3 376 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 STARD13Q9Y3M8 1113 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 KRT15P19012 456 aa19.83■□□□□ 0.77
SSU72-204ENST00000378726 CD68P34810 354 aaPredicted RBP19.83■□□□□ 0.77
SSU72-204ENST00000378726 ADGRD1Q6QNK2 874 aa19.83■□□□□ 0.77
SSU72-204ENST00000378726 DDX53Q86TM3 631 aaKnown RBP19.83■□□□□ 0.77
SSU72-204ENST00000378726 C4orf33Q8N1A6 199 aa19.83■□□□□ 0.77
SSU72-204ENST00000378726 MAB21L3Q8N8X9 362 aa19.83■□□□□ 0.77
SSU72-204ENST00000378726 DPF3Q92784 378 aa19.83■□□□□ 0.77
SSU72-204ENST00000378726 ERP27Q96DN0 273 aa19.83■□□□□ 0.77
SSU72-204ENST00000378726 TEKT5Q96M29 485 aa19.83■□□□□ 0.77
SSU72-204ENST00000378726 ZNF512Q96ME7 567 aaPredicted RBP19.83■□□□□ 0.77
SSU72-204ENST00000378726 PAFAH2Q99487 392 aa19.83■□□□□ 0.77
SSU72-204ENST00000378726 HERC2P3Q9BVR0 1158 aa19.83■□□□□ 0.77
SSU72-204ENST00000378726 CHKBQ9Y259 395 aa19.83■□□□□ 0.77
SSU72-204ENST00000378726 SPARCL1Q14515 664 aa19.83■□□□□ 0.76
SSU72-204ENST00000378726 KBTBD12Q3ZCT8 623 aa19.83■□□□□ 0.76
SSU72-204ENST00000378726 ZNF683Q8IZ20 524 aa19.83■□□□□ 0.76
SSU72-204ENST00000378726 ATPAF2Q8N5M1 289 aa19.83■□□□□ 0.76
SSU72-204ENST00000378726 AUTS2Q8WXX7 1259 aa19.83■□□□□ 0.76
SSU72-204ENST00000378726 HSFX1Q9UBD0 423 aa19.83■□□□□ 0.76
SSU72-204ENST00000378726 SDR42E2A6NKP2 422 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 WASH4PA8MWX3 477 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 PRPF4O43172 522 aaKnown RBP eCLIP19.82■□□□□ 0.76
SSU72-204ENST00000378726 URODP06132 367 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 RPA3P35244 121 aaPredicted RBP19.82■□□□□ 0.76
SSU72-204ENST00000378726 ATP5C1P36542 298 aaKnown RBP19.82■□□□□ 0.76
SSU72-204ENST00000378726 ALDH1A3P47895 512 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 RING1Q06587 406 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 PRPF39Q86UA1 669 aaKnown RBP19.82■□□□□ 0.76
SSU72-204ENST00000378726 DHRS4Q9BTZ2 278 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 ZYG11BQ9C0D3 744 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 PLAC1Q9HBJ0 212 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 TXLNGQ9NUQ3 528 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 PIH1D1Q9NWS0 290 aaKnown RBP19.82■□□□□ 0.76
SSU72-204ENST00000378726 GREB1Q4ZG55 1949 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 ARHGAP42A6NI28 874 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 TRDMT1O14717 391 aaKnown RBP19.82■□□□□ 0.76
SSU72-204ENST00000378726 MAFKO60675 156 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 BAIAP3O94812 1187 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 IGLV3-27P01718 113 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 HMGA1P17096 107 aaKnown RBP19.82■□□□□ 0.76
SSU72-204ENST00000378726 DNAJB2P25686 324 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 KPNA1P52294 538 aaPredicted RBP19.82■□□□□ 0.76
SSU72-204ENST00000378726 SESN2P58004 480 aaPredicted RBP19.82■□□□□ 0.76
SSU72-204ENST00000378726 RAP1GAP2Q684P5 730 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 ITPRIPL1Q6GPH6 555 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 FBXL22Q6P050 247 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 UNC5AQ6ZN44 842 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 USP33Q8TEY7 942 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 TMEM237Q96Q45 408 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 GORASP1Q9BQQ3 440 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 GBA3Q9H227 469 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 IL23AQ9NPF7 189 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 PPARGC1AQ9UBK2 798 aaKnown RBP19.82■□□□□ 0.76
SSU72-204ENST00000378726 DNMT3LQ9UJW3 386 aa19.82■□□□□ 0.76
SSU72-204ENST00000378726 ZNF840PA6NDX5 716 aa19.81■□□□□ 0.76
SSU72-204ENST00000378726 CNTN5O94779 1100 aa19.81■□□□□ 0.76
SSU72-204ENST00000378726 CSH1P0DML2 217 aa19.81■□□□□ 0.76
SSU72-204ENST00000378726 CSH2P0DML3 217 aa19.81■□□□□ 0.76
SSU72-204ENST00000378726 NFKB1P19838 968 aa19.81■□□□□ 0.76
SSU72-204ENST00000378726 TARSP26639 723 aaKnown RBP19.81■□□□□ 0.76
SSU72-204ENST00000378726 RAB33AQ14088 237 aa19.81■□□□□ 0.76
SSU72-204ENST00000378726 SLC1A5Q15758 541 aa19.81■□□□□ 0.76
SSU72-204ENST00000378726 TAF12Q16514 161 aa19.81■□□□□ 0.76
SSU72-204ENST00000378726 AFMIDQ63HM1 303 aa19.81■□□□□ 0.76
SSU72-204ENST00000378726 ZNF276Q8N554 614 aa19.81■□□□□ 0.76
SSU72-204ENST00000378726 CNTD1Q8N815 330 aa19.81■□□□□ 0.76
SSU72-204ENST00000378726 PDZD8Q8NEN9 1154 aa19.81■□□□□ 0.76
SSU72-204ENST00000378726 DCAKDQ8WVC6 231 aa19.81■□□□□ 0.76
SSU72-204ENST00000378726 CDK5RAP1Q96SZ6 601 aaKnown RBP19.81■□□□□ 0.76
SSU72-204ENST00000378726 TRIM56Q9BRZ2 755 aaKnown RBP19.81■□□□□ 0.76
SSU72-204ENST00000378726 HAO1Q9UJM8 370 aa19.81■□□□□ 0.76
SSU72-204ENST00000378726 A0A1W2PPM1 405 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 MATN3O15232 486 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 GSTA2P09210 222 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 RHOQP17081 205 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 PAX7P23759 505 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 PAPOLAP51003 745 aaKnown RBP19.8■□□□□ 0.76
SSU72-204ENST00000378726 KCNQ1P51787 676 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 C1QTNF8P60827 252 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 SETDB1Q15047 1291 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 SNX30Q5VWJ9 437 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 CASC4Q6P4E1 433 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 C16orf59Q7L2K0 433 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 TFAP2DQ7Z6R9 452 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 OVCA2Q8WZ82 227 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 IGSF8Q969P0 613 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 RAB3IPQ96QF0 476 aaPredicted RBP19.8■□□□□ 0.76
SSU72-204ENST00000378726 SMC6Q96SB8 1091 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 NACA2Q9H009 215 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 TTLL3Q9Y4R7 772 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 IKBKGQ9Y6K9 419 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 USH1CQ9Y6N9 552 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 LTBP2Q14767 1821 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 CARNS1A5YM72 827 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 ZBBXA8MT70 800 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 AP2A1O95782 977 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 CDC25CP30307 473 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms