RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 EMILIN1Q9Y6C2 1016 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 LRRC14BA6NHZ5 514 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 OR5F1O95221 314 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 HIST1H2ABP04908 130 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 GPC3P51654 580 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 COASYQ13057 564 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 NME3Q13232 169 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 TNFAIP1Q13829 316 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 ALG11Q2TAA5 492 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 HIST3H2AQ7L7L0 130 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 THNSL1Q8IYQ7 743 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 ACBD4Q8NC06 268 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 HIST1H2ACQ93077 130 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 KIAA1683Q9H0B3 1180 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 TSR3Q9UJK0 312 aaKnown RBP8.86□□□□□ -0.99
LIG3-202ENST00000378526 C21orf2O43822 256 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 TIMM10P62072 90 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 HES5Q5TA89 166 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 FAM199XQ6PEV8 388 aaPredicted RBP8.86□□□□□ -0.99
LIG3-202ENST00000378526 ZCCHC12Q6PEW1 402 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 ZZZ3Q8IYH5 903 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 APOPT1Q96IL0 206 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 SEMA6AQ9H2E6 1030 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 FAM86C1Q9NVL1 165 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 TRPV2Q9Y5S1 764 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 PLCH2O75038 1416 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 SRCP12931 536 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 ALADP13716 330 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 GADD45AP24522 165 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 LCN1P31025 176 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 AP2S1P53680 142 aaPredicted RBP8.86□□□□□ -0.99
LIG3-202ENST00000378526 ZNF425Q6IV72 752 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 DPP8Q6V1X1 898 aaPredicted RBP8.86□□□□□ -0.99
LIG3-202ENST00000378526 OFCC1Q8IZS5 231 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 ADCY4Q8NFM4 1077 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 THAP6Q8TBB0 222 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 ANKS1AQ92625 1134 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 CCDC106Q9BWC9 280 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 RSPH9Q9H1X1 276 aaPredicted RBP8.86□□□□□ -0.99
LIG3-202ENST00000378526 FAM105AQ9NUU6 356 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 APEX2Q9UBZ4 518 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 HMGXB4Q9UGU5 601 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 RBM7Q9Y580 266 aaKnown RBP8.86□□□□□ -0.99
LIG3-202ENST00000378526 FRMPD2Q68DX3 1309 aaPredicted RBP8.86□□□□□ -0.99
LIG3-202ENST00000378526 PRMT5O14744 637 aaPredicted RBP8.86□□□□□ -0.99
LIG3-202ENST00000378526 ATXN8OSP0DMR3 200 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 RPL4P36578 427 aaKnown RBP8.86□□□□□ -0.99
LIG3-202ENST00000378526 CDH11P55287 796 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 TCIRG1Q13488 830 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 SEMA3AQ14563 771 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 LPCAT1Q8NF37 534 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 PHF10Q8WUB8 498 aaKnown RBP8.86□□□□□ -0.99
LIG3-202ENST00000378526 REEP2Q9BRK0 252 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 DPPA5A6NC42 116 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 ATP6V1G2-DDX39BF2Z307 99 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 ASNSP08243 561 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 TMBIM6P55061 237 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 LSM3P62310 102 aaKnown RBP8.86□□□□□ -0.99
LIG3-202ENST00000378526 PPP2R2BQ00005 443 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 ELP6Q0PNE2 266 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 COTL1Q14019 142 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 SPATA6LQ8N4H0 392 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 NOA1Q8NC60 698 aaKnown RBP8.86□□□□□ -0.99
LIG3-202ENST00000378526 SLC20A1Q8WUM9 679 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 TUBG2Q9NRH3 451 aa8.86□□□□□ -0.99
LIG3-202ENST00000378526 EVLQ9UI08 416 aaPredicted RBP8.86□□□□□ -0.99
LIG3-202ENST00000378526 J3QR89 54 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 RSL1D1O76021 490 aaKnown RBP8.85□□□□□ -0.99
LIG3-202ENST00000378526 ADAMTS2O95450 1211 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 CRABP2P29373 138 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 IL2P60568 153 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 ARHGEF7Q14155 803 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 BMT2Q1RMZ1 405 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 BAP1Q92560 729 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 DBNDD2Q9BQY9 259 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 TBC1D10AQ9BXI6 508 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 OXCT2Q9BYC2 517 aaPredicted RBP8.85□□□□□ -0.99
LIG3-202ENST00000378526 TRIM36Q9NQ86 728 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 MAN2B2Q9Y2E5 1009 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 ARL5AQ9Y689 179 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 ITGA10O75578 1167 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 RORCP51449 518 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 NR6A1Q15406 480 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 LRIF1Q5T3J3 769 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 SAPCD2Q86UD0 394 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 C16orf58Q96GQ5 468 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 HSPA12BQ96MM6 686 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 PNKPQ96T60 521 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 DPY30Q9C005 99 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 TRAPPC8Q9Y2L5 1435 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 BNIP3LO60238 219 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 PLEKHA8P1O95397 391 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 SNAP29O95721 258 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 SRGNP10124 158 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 SLC2A5P22732 501 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 CDC25CP30307 473 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 ATP2C1P98194 919 aaPredicted RBP8.85□□□□□ -0.99
LIG3-202ENST00000378526 ECT2LQ008S8 904 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 CNPY1Q3B7I2 92 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 GTF2IRD2BQ6EKJ0 949 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms