RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 CAMK2GQ13555 558 aaPredicted RBP13.55□□□□□ -0.24
CKAP2-202ENST00000378034 DPYSL3Q14195 570 aa13.55□□□□□ -0.24
CKAP2-202ENST00000378034 HNRNPA1L2Q32P51 320 aaKnown RBP13.55□□□□□ -0.24
CKAP2-202ENST00000378034 ATP13A4Q4VNC1 1196 aa13.55□□□□□ -0.24
CKAP2-202ENST00000378034 TSSK4Q6SA08 328 aa13.55□□□□□ -0.24
CKAP2-202ENST00000378034 WDR5BQ86VZ2 330 aa13.55□□□□□ -0.24
CKAP2-202ENST00000378034 UBE2Q2Q8WVN8 375 aa13.55□□□□□ -0.24
CKAP2-202ENST00000378034 NOL6Q9H6R4 1146 aaKnown RBP13.55□□□□□ -0.24
CKAP2-202ENST00000378034 PRDM16Q9HAZ2 1276 aa13.55□□□□□ -0.24
CKAP2-202ENST00000378034 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.55□□□□□ -0.24
CKAP2-202ENST00000378034 PCDHGA2Q9Y5H1 932 aa13.55□□□□□ -0.24
CKAP2-202ENST00000378034 EDDM13A0A1B0GTR0 161 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 TCRBV21S2A2A0A5A6 115 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 RASA4BC9J798 803 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 CBX4O00257 560 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 RASA4O43374 803 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 KDELR3O43731 214 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 ZMPSTE24O75844 475 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 C7P10643 843 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 COL9A1P20849 921 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 KDELR1P24390 212 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 IL4RP24394 825 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 GJC1P36383 396 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 ZFYVE27Q5T4F4 411 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 AFMIDQ63HM1 303 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 ZC3H14Q6PJT7 736 aaKnown RBP13.54□□□□□ -0.24
CKAP2-202ENST00000378034 TMCO3Q6UWJ1 677 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 METTL3Q86U44 580 aaKnown RBP13.54□□□□□ -0.24
CKAP2-202ENST00000378034 SYCE1Q8N0S2 351 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 SH2D3CQ8N5H7 860 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 ZBTB44Q8NCP5 570 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 KIAA1524Q8TCG1 905 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 RPL10LQ96L21 214 aaKnown RBP13.54□□□□□ -0.24
CKAP2-202ENST00000378034 CALN1Q9BXU9 219 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 LRRC19Q9H756 370 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 POLR3BQ9NW08 1133 aaPredicted RBP13.54□□□□□ -0.24
CKAP2-202ENST00000378034 SLCO3A1Q9UIG8 710 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 ARHGAP42A6NI28 874 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 H0Y858 1186 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 DCLK1O15075 740 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 SNAP91O60641 907 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 PTMAP06454 111 aaKnown RBP13.54□□□□□ -0.24
CKAP2-202ENST00000378034 CNR2P34972 360 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 SERPINB6P35237 376 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 ACVRL1P37023 503 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 ODF2Q5BJF6 829 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 KIAA1211LQ6NV74 962 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 CASKIN2Q8WXE0 1202 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 FAF2Q96CS3 445 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 KLC2Q9H0B6 622 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 RAD54BQ9Y620 910 aa13.54□□□□□ -0.24
CKAP2-202ENST00000378034 AXIN1O15169 862 aa13.53□□□□□ -0.24
CKAP2-202ENST00000378034 SRCP12931 536 aa13.53□□□□□ -0.24
CKAP2-202ENST00000378034 HLA-EP13747 358 aa13.53□□□□□ -0.24
CKAP2-202ENST00000378034 AMPD1P23109 780 aa13.53□□□□□ -0.24
CKAP2-202ENST00000378034 STK19P49842 368 aaPredicted RBP13.53□□□□□ -0.24
CKAP2-202ENST00000378034 SERINC3Q13530 473 aa13.53□□□□□ -0.24
CKAP2-202ENST00000378034 ANKRD20A8PQ5CZ79 823 aa13.53□□□□□ -0.24
CKAP2-202ENST00000378034 ANO7Q6IWH7 933 aa13.53□□□□□ -0.24
CKAP2-202ENST00000378034 LRRC57Q8N9N7 239 aa13.53□□□□□ -0.24
CKAP2-202ENST00000378034 OR2T3Q8NH03 318 aa13.53□□□□□ -0.24
CKAP2-202ENST00000378034 FRS2Q8WU20 508 aa13.53□□□□□ -0.24
CKAP2-202ENST00000378034 ATRIPQ8WXE1 791 aa13.53□□□□□ -0.24
CKAP2-202ENST00000378034 CEP44Q9C0F1 390 aa13.53□□□□□ -0.24
CKAP2-202ENST00000378034 PRSS16Q9NQE7 514 aa13.53□□□□□ -0.24
CKAP2-202ENST00000378034 BCCIPQ9P287 314 aaKnown RBP eCLIP13.53□□□□□ -0.24
CKAP2-202ENST00000378034 HYOU1Q9Y4L1 999 aa13.53□□□□□ -0.24
CKAP2-202ENST00000378034 MACROD2A1Z1Q3 448 aa13.52□□□□□ -0.24
CKAP2-202ENST00000378034 LRRD1A4D1F6 860 aa13.52□□□□□ -0.24
CKAP2-202ENST00000378034 TTC34A8MYJ7 566 aa13.52□□□□□ -0.24
CKAP2-202ENST00000378034 LILRB5O75023 590 aa13.52□□□□□ -0.24
CKAP2-202ENST00000378034 CD48P09326 243 aa13.52□□□□□ -0.24
CKAP2-202ENST00000378034 GABRG2P18507 467 aa13.52□□□□□ -0.24
CKAP2-202ENST00000378034 FNTBP49356 437 aa13.52□□□□□ -0.24
CKAP2-202ENST00000378034 SERPINH1P50454 418 aaKnown RBP13.52□□□□□ -0.24
CKAP2-202ENST00000378034 ARF5P84085 180 aa13.52□□□□□ -0.24
CKAP2-202ENST00000378034 BYSLQ13895 437 aaKnown RBP13.52□□□□□ -0.24
CKAP2-202ENST00000378034 DLG2Q15700 870 aa13.52□□□□□ -0.24
CKAP2-202ENST00000378034 KATNAL2Q8IYT4 538 aa13.52□□□□□ -0.24
CKAP2-202ENST00000378034 ATP11CQ8NB49 1132 aa13.52□□□□□ -0.24
CKAP2-202ENST00000378034 MDGA1Q8NFP4 955 aa13.52□□□□□ -0.24
CKAP2-202ENST00000378034 HMGB4Q8WW32 186 aa13.52□□□□□ -0.24
CKAP2-202ENST00000378034 RAPGEF5Q92565 580 aa13.52□□□□□ -0.24
CKAP2-202ENST00000378034 HMCESQ96FZ2 354 aa13.52□□□□□ -0.24
CKAP2-202ENST00000378034 SLC39A8Q9C0K1 460 aa13.52□□□□□ -0.24
CKAP2-202ENST00000378034 FANCMQ8IYD8 2048 aa13.52□□□□□ -0.24
CKAP2-202ENST00000378034 CCDC66A2RUB6 948 aa13.52□□□□□ -0.25
CKAP2-202ENST00000378034 GRID2IPA4D2P6 1211 aa13.52□□□□□ -0.25
CKAP2-202ENST00000378034 RNASEH1O60930 286 aaKnown RBP13.52□□□□□ -0.25
CKAP2-202ENST00000378034 MT-CO1P00395 513 aa13.52□□□□□ -0.25
CKAP2-202ENST00000378034 KRT1P04264 644 aa13.52□□□□□ -0.25
CKAP2-202ENST00000378034 GLDCP23378 1020 aa13.52□□□□□ -0.25
CKAP2-202ENST00000378034 CTNNA1P35221 906 aaKnown RBP13.52□□□□□ -0.25
CKAP2-202ENST00000378034 COPAP53621 1224 aa13.52□□□□□ -0.25
CKAP2-202ENST00000378034 ZBTB16Q05516 673 aa13.52□□□□□ -0.25
CKAP2-202ENST00000378034 DMWDQ09019 674 aa13.52□□□□□ -0.25
CKAP2-202ENST00000378034 MMRN1Q13201 1228 aa13.52□□□□□ -0.25
CKAP2-202ENST00000378034 PAFAH1B3Q15102 231 aaKnown RBP13.52□□□□□ -0.25
CKAP2-202ENST00000378034 ACCSLQ4AC99 568 aa13.52□□□□□ -0.25
CKAP2-202ENST00000378034 INO80DQ53TQ3 878 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms