RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 EPB41L1Q9H4G0 881 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 WDR41Q9HAD4 459 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 EIF2B3Q9NR50 452 aaKnown RBP18.35■□□□□ 0.53
GNE-201ENST00000377902 GALNT8Q9NY28 637 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.35■□□□□ 0.53
GNE-201ENST00000377902 LMCD1Q9NZU5 365 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 GTF2IRD1Q9UHL9 959 aa18.35■□□□□ 0.53
GNE-201ENST00000377902 CENPFP49454 3210 aa18.34■□□□□ 0.53
GNE-201ENST00000377902 HACD1B0YJ81 288 aa18.34■□□□□ 0.53
GNE-201ENST00000377902 H3BSA7 217 aa18.34■□□□□ 0.53
GNE-201ENST00000377902 RNASEH2AO75792 299 aaKnown RBP18.34■□□□□ 0.53
GNE-201ENST00000377902 PTPN1P18031 435 aaKnown RBP18.34■□□□□ 0.53
GNE-201ENST00000377902 ZNF460Q14592 562 aa18.34■□□□□ 0.53
GNE-201ENST00000377902 METTL21CQ5VZV1 264 aa18.34■□□□□ 0.53
GNE-201ENST00000377902 C16orf89Q6UX73 402 aa18.34■□□□□ 0.53
GNE-201ENST00000377902 GRIN3AQ8TCU5 1115 aa18.34■□□□□ 0.53
GNE-201ENST00000377902 NLRP7Q8WX94 980 aa18.34■□□□□ 0.53
GNE-201ENST00000377902 ACE2Q9BYF1 805 aaPredicted RBP18.34■□□□□ 0.53
GNE-201ENST00000377902 SMARCAD1Q9H4L7 1026 aa18.34■□□□□ 0.53
GNE-201ENST00000377902 C20orf96Q9NUD7 363 aaPredicted RBP18.34■□□□□ 0.53
GNE-201ENST00000377902 PTTG2Q9NZH5 202 aa18.34■□□□□ 0.53
GNE-201ENST00000377902 DNAH12Q6ZR08 3092 aa18.34■□□□□ 0.53
GNE-201ENST00000377902 HDAC3O15379 428 aa18.34■□□□□ 0.53
GNE-201ENST00000377902 TXNP10599 105 aaKnown RBP18.34■□□□□ 0.53
GNE-201ENST00000377902 RPL14P50914 215 aaKnown RBP18.34■□□□□ 0.53
GNE-201ENST00000377902 NAB1Q13506 487 aa18.34■□□□□ 0.53
GNE-201ENST00000377902 GRM3Q14832 879 aa18.34■□□□□ 0.53
GNE-201ENST00000377902 SERPINI1Q99574 410 aa18.34■□□□□ 0.53
GNE-201ENST00000377902 SNTG2Q9NY99 539 aa18.34■□□□□ 0.53
GNE-201ENST00000377902 RAB26Q9ULW5 256 aa18.34■□□□□ 0.53
GNE-201ENST00000377902 PRPF19Q9UMS4 504 aaKnown RBP18.34■□□□□ 0.53
GNE-201ENST00000377902 CITO14578 2027 aa18.33■□□□□ 0.53
GNE-201ENST00000377902 TSPAN1O60635 241 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 CSPG5O95196 566 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 GLUD2P49448 558 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 CYTH1Q15438 398 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 OTUD1Q5VV17 481 aaPredicted RBP18.33■□□□□ 0.52
GNE-201ENST00000377902 EXOC8Q8IYI6 725 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 SLC2A14Q8TDB8 520 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 PPP1R13LQ8WUF5 828 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 ATP6V1E2Q96A05 226 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 ISL2Q96A47 359 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 VPS39Q96JC1 886 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 OMDQ99983 421 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 NAT9Q9BTE0 207 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 MRPL1Q9BYD6 325 aaKnown RBP18.33■□□□□ 0.52
GNE-201ENST00000377902 LRRC40Q9H9A6 602 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 KPNA7A9QM74 516 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 TMEM114B3SHH9 223 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 ZBTB24O43167 697 aaPredicted RBP18.33■□□□□ 0.52
GNE-201ENST00000377902 TOMM70O94826 608 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 FGFR3P22607 806 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 NDUFV1P49821 464 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 RPL26P61254 145 aaKnown RBP18.33■□□□□ 0.52
GNE-201ENST00000377902 MPP3Q13368 585 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 SYPL2Q5VXT5 272 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 TMEM135Q86UB9 458 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 RP9Q8TA86 221 aaKnown RBP18.33■□□□□ 0.52
GNE-201ENST00000377902 SCYL1Q96KG9 808 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 ZNF512Q96ME7 567 aaPredicted RBP18.33■□□□□ 0.52
GNE-201ENST00000377902 PCDHAC1Q9H158 963 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 Q9H521 79 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 NDUFA13Q9P0J0 144 aa18.33■□□□□ 0.52
GNE-201ENST00000377902 SSC5DA1L4H1 1573 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 PTPN3P26045 913 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 NMBRP28336 390 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 PPARGP37231 505 aaPredicted RBP18.32■□□□□ 0.52
GNE-201ENST00000377902 EN1Q05925 392 aaPredicted RBP18.32■□□□□ 0.52
GNE-201ENST00000377902 TMEM62Q0P6H9 643 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 ART3Q13508 389 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 IL23RQ5VWK5 629 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 KCNMB4Q86W47 210 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 LSMEM2Q8N112 164 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 PCDH20Q8N6Y1 951 aaKnown RBP18.32■□□□□ 0.52
GNE-201ENST00000377902 SNX31Q8N9S9 440 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 RNF169Q8NCN4 708 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 KCTD4Q8WVF5 259 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 CNDP1Q96KN2 507 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 LIN28AQ9H9Z2 209 aaKnown RBP18.32■□□□□ 0.52
GNE-201ENST00000377902 ANLNQ9NQW6 1124 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 FIS1Q9Y3D6 152 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 RAP2CQ9Y3L5 183 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 TNFAIP8O95379 198 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 SETSIPP0DME0 302 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 TKTP29401 623 aaKnown RBP18.32■□□□□ 0.52
GNE-201ENST00000377902 SLC5A2P31639 672 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 BST2Q10589 180 aaKnown RBP18.32■□□□□ 0.52
GNE-201ENST00000377902 FAM187BQ17R55 369 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 ZDHHC17Q8IUH5 632 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 TMIGD2Q96BF3 282 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 APBA2Q99767 749 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 MRPS26Q9BYN8 205 aaKnown RBP18.32■□□□□ 0.52
GNE-201ENST00000377902 DRC3Q9H069 523 aa18.32■□□□□ 0.52
GNE-201ENST00000377902 NUP205Q92621 2012 aa18.31■□□□□ 0.52
GNE-201ENST00000377902 C7orf72A4D263 438 aa18.31■□□□□ 0.52
GNE-201ENST00000377902 FAM58BPP0C7Q3 252 aa18.31■□□□□ 0.52
GNE-201ENST00000377902 ZNF286BP0CG31 522 aa18.31■□□□□ 0.52
GNE-201ENST00000377902 HDCP19113 662 aa18.31■□□□□ 0.52
GNE-201ENST00000377902 ME2P23368 584 aa18.31■□□□□ 0.52
GNE-201ENST00000377902 MATKP42679 507 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms