RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 COLEC11Q9BWP8 271 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 DNAI2Q9GZS0 605 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 IGSF9Q9P2J2 1179 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 CFLARO15519 480 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 CTBP1Q13363 440 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 ITGA7Q13683 1181 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 USP10Q14694 798 aaKnown RBP16.57■□□□□ 0.24
TRIM27-202ENST00000377199 ZMIZ2Q8NF64 920 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 MS4A4AQ96JQ5 239 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 NUF2Q9BZD4 464 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 FLRT1Q9NZU1 646 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 GTF2IRD1Q9UHL9 959 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 CYP2B6P20813 491 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 BDNFP23560 247 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 PSEN2P49810 448 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 DSG1Q02413 1049 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 GRB14Q14449 540 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 THEMIS2Q5TEJ8 643 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 PDZD4Q76G19 769 aaPredicted RBP16.56■□□□□ 0.24
TRIM27-202ENST00000377199 MYLK4Q86YV6 388 aaPredicted RBP16.56■□□□□ 0.24
TRIM27-202ENST00000377199 VCXQ9H320 206 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 TXNDC9O14530 226 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 MOCS2O96007 188 aaPredicted RBP16.56■□□□□ 0.24
TRIM27-202ENST00000377199 KCNE1P15382 129 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 WARSP23381 471 aaKnown RBP16.56■□□□□ 0.24
TRIM27-202ENST00000377199 SCNN1AP37088 669 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 RPL34P49207 117 aaKnown RBP16.56■□□□□ 0.24
TRIM27-202ENST00000377199 NAGLUP54802 743 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 TBL3Q12788 808 aaKnown RBP16.56■□□□□ 0.24
TRIM27-202ENST00000377199 LDLRAD1Q5T700 205 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 TMEM198Q66K66 360 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 IRGCQ6NXR0 463 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 DENND6AQ8IWF6 608 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 CCNYL1Q8N7R7 359 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 NT5C3BQ969T7 300 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 GATA5Q9BWX5 397 aaPredicted RBP16.56■□□□□ 0.24
TRIM27-202ENST00000377199 CDH22Q9UJ99 828 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 TLK1Q9UKI8 766 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 F8W8V4 182 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 LIN7AO14910 233 aaPredicted RBP16.56■□□□□ 0.24
TRIM27-202ENST00000377199 NUDT2P50583 147 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 SCNN1GP51170 649 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 TBCCQ15814 346 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 PDCD2Q16342 344 aaPredicted RBP16.56■□□□□ 0.24
TRIM27-202ENST00000377199 ARL13BQ3SXY8 428 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 FAM219BQ5XKK7 198 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 CYS1Q717R9 158 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 SLC41A1Q8IVJ1 513 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 TOP6BLQ8N6T0 577 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 KCTD4Q8WVF5 259 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 LENG8Q96PV6 779 aaPredicted RBP16.56■□□□□ 0.24
TRIM27-202ENST00000377199 FTHL17Q9BXU8 183 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 MIOSQ9NXC5 875 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 FBXW11Q9UKB1 542 aa16.56■□□□□ 0.24
TRIM27-202ENST00000377199 G3V2L1 256 aa16.55■□□□□ 0.24
TRIM27-202ENST00000377199 MPP1Q00013 466 aa16.55■□□□□ 0.24
TRIM27-202ENST00000377199 CDC16Q13042 620 aa16.55■□□□□ 0.24
TRIM27-202ENST00000377199 RNF135Q8IUD6 432 aa16.55■□□□□ 0.24
TRIM27-202ENST00000377199 CMTM5Q96DZ9 223 aa16.55■□□□□ 0.24
TRIM27-202ENST00000377199 SLC2A13Q96QE2 648 aa16.55■□□□□ 0.24
TRIM27-202ENST00000377199 VAPBO95292 243 aa16.55■□□□□ 0.24
TRIM27-202ENST00000377199 POMCP01189 267 aa16.55■□□□□ 0.24
TRIM27-202ENST00000377199 ITGAXP20702 1163 aa16.55■□□□□ 0.24
TRIM27-202ENST00000377199 SEPT6Q14141 434 aa16.55■□□□□ 0.24
TRIM27-202ENST00000377199 CCDC153Q494R4 210 aa16.55■□□□□ 0.24
TRIM27-202ENST00000377199 TMEM135Q86UB9 458 aa16.55■□□□□ 0.24
TRIM27-202ENST00000377199 SCAMP5Q8TAC9 235 aa16.55■□□□□ 0.24
TRIM27-202ENST00000377199 ECSITQ9BQ95 431 aa16.55■□□□□ 0.24
TRIM27-202ENST00000377199 ACE2Q9BYF1 805 aaPredicted RBP16.55■□□□□ 0.24
TRIM27-202ENST00000377199 CDH19Q9H159 772 aa16.55■□□□□ 0.24
TRIM27-202ENST00000377199 EBF3Q9H4W6 596 aa16.55■□□□□ 0.24
TRIM27-202ENST00000377199 RUVBL2Q9Y230 463 aaKnown RBP16.55■□□□□ 0.24
TRIM27-202ENST00000377199 INPP5FQ9Y2H2 1132 aa16.55■□□□□ 0.24
TRIM27-202ENST00000377199 ZSWIM8A7E2V4 1837 aa16.55■□□□□ 0.24
TRIM27-202ENST00000377199 ZNF195O14628 629 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 MSI1O43347 362 aaKnown RBP16.54■□□□□ 0.24
TRIM27-202ENST00000377199 TRIM13O60858 407 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 PMPCBO75439 489 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 GRIA4P48058 902 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 PPIDQ08752 370 aaKnown RBP16.54■□□□□ 0.24
TRIM27-202ENST00000377199 PCSK7Q16549 785 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 IL31Q6EBC2 164 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 ZNF280DQ6N043 979 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 USP50Q70EL3 339 aaPredicted RBP16.54■□□□□ 0.24
TRIM27-202ENST00000377199 USP13Q92995 863 aaPredicted RBP16.54■□□□□ 0.24
TRIM27-202ENST00000377199 EPAS1Q99814 870 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 GBA3Q9H227 469 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 TCF7L2Q9NQB0 619 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 SSX2IPQ9Y2D8 614 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 C17orf102A2RUQ5 167 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 MBLAC1A4D2B0 266 aaPredicted RBP16.54■□□□□ 0.24
TRIM27-202ENST00000377199 COX4I1P13073 169 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 TCN1P20061 433 aaPredicted RBP16.54■□□□□ 0.24
TRIM27-202ENST00000377199 PEX2P28328 305 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 CBLBQ13191 982 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 TRIP10Q15642 601 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 RNF111Q6ZNA4 994 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 TAC4Q86UU9 113 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 DOCK3Q8IZD9 2030 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 TSNARE1Q96NA8 513 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms