RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 STK39Q9UEW8 545 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 NOS3P29474 1203 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 HSPA13P48723 471 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 RCN1Q15293 331 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 PAGE2BQ5JRK9 111 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 EPS8L1Q8TE68 723 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 CAPNS2Q96L46 248 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 DNAJC18Q9H819 358 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 PRKAG3Q9UGI9 489 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 MEI4A8MW99 385 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 RGS14O43566 566 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 SERPINE1P05121 402 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 ITGB5P18084 799 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 KCNA10Q16322 511 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 DUSP28Q4G0W2 176 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 CEP68Q76N32 757 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 TTPALQ9BTX7 342 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 BTBD7Q9P203 1132 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 CATP04040 527 aaKnown RBP13.83□□□□□ -0.2
GPC6-201ENST00000377047 CNPP09543 421 aaKnown RBP13.83□□□□□ -0.2
GPC6-201ENST00000377047 CCNB1P14635 433 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 CCR4P51679 360 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 EVX2Q03828 476 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 ITIH4Q14624 930 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 C12orf29Q8N999 325 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 SNRNP25Q9BV90 132 aaKnown RBP13.83□□□□□ -0.2
GPC6-201ENST00000377047 TMPRSS4Q9NRS4 437 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 NINJ2Q9NZG7 142 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.83□□□□□ -0.22e-7■■■■□ 25.2
GPC6-201ENST00000377047 GNRH1P01148 92 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 SELPP16109 830 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 PAX3P23760 479 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 SHROOM1Q2M3G4 852 aaPredicted RBP13.83□□□□□ -0.2
GPC6-201ENST00000377047 IL27RAQ6UWB1 636 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 FAM180AQ6UWF9 173 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 LUZP2Q86TE4 346 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 SYT12Q8IV01 421 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 CYP4X1Q8N118 509 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 OR5B17Q8NGF7 314 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 PRRG3Q9BZD7 231 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 LZTS1Q9Y250 596 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 SMIM35A0A1B0GVV1 85 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 H3BMM5 538 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 TRIM13O60858 407 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 ZSCAN5DPP0CG00 497 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 ST3GAL1Q11201 340 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 SPIDRQ14159 915 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 PCID2Q5JVF3 399 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 ARHGAP17Q68EM7 881 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 C7orf61Q8IZ16 206 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 TCP10LQ8TDR4 215 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 PPP1R14AQ96A00 147 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 APOPT1Q96IL0 206 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 MRPL45Q9BRJ2 306 aaKnown RBP13.83□□□□□ -0.2
GPC6-201ENST00000377047 CHST7Q9NS84 486 aa13.83□□□□□ -0.2
GPC6-201ENST00000377047 FAM220BPB1ANY3 271 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 CCL16O15467 120 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 PARNO95453 639 aaKnown RBP13.82□□□□□ -0.2
GPC6-201ENST00000377047 ATP6V1C1P21283 382 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 EEF1DP3Q658K8 133 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 SLC41A1Q8IVJ1 513 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 MRPL48Q96GC5 212 aaKnown RBP13.82□□□□□ -0.2
GPC6-201ENST00000377047 RNPEPQ9H4A4 650 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 PRDM16Q9HAZ2 1276 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.82□□□□□ -0.2
GPC6-201ENST00000377047 VTI1BQ9UEU0 232 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 NEDD8-MDP1E9PL57 170 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 PHGDHO43175 533 aaKnown RBP13.82□□□□□ -0.2
GPC6-201ENST00000377047 TLR5O60602 858 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 USP2O75604 605 aaPredicted RBP13.82□□□□□ -0.2
GPC6-201ENST00000377047 ABCG1P45844 678 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 PIK3CGP48736 1102 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 C21orf59P57076 290 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 CRADDP78560 199 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 TATDN1Q6P1N9 297 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 FGD2Q7Z6J4 655 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 IL22Q9GZX6 179 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 CNTNAP1P78357 1384 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 ADH1CP00326 375 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 IFNA16P05015 189 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 ATP6V1B1P15313 513 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 MAPK8P45983 427 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 DSG1Q02413 1049 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 FAAP100Q0VG06 881 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 AADACL2Q6P093 401 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 FOXR1Q6PIV2 292 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 DNAJC14Q6Y2X3 702 aaPredicted RBP13.82□□□□□ -0.2
GPC6-201ENST00000377047 OTOP2Q7RTS6 562 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 CYP4Z2PQ8N1L4 340 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 NACC2Q96BF6 587 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 DNAJC1Q96KC8 554 aaKnown RBP13.82□□□□□ -0.2
GPC6-201ENST00000377047 EXOC2Q96KP1 924 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 SEMA4BQ9NPR2 832 aaPredicted RBP13.82□□□□□ -0.2
GPC6-201ENST00000377047 COL1A2P08123 1366 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 A0A0A0MRY4 1105 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 ETS1P14921 441 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 CALB2P22676 271 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 CDC25CP30307 473 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 GLUD2P49448 558 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 FASTKQ14296 549 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms