RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 ARSAP15289 507 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 KYAT1Q16773 422 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 ZRANB3Q5FWF4 1079 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 RINLQ6ZS11 566 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 CLNKQ7Z7G1 428 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 RIBC1Q8N443 379 aaPredicted RBP11.89□□□□□ -0.51
DDR1-227ENST00000376570 FBXO27Q8NI29 283 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 SMIM14Q96QK8 99 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 LRRC40Q9H9A6 602 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 SNX15Q9NRS6 342 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 KCTD3Q9Y597 815 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 WASF2Q9Y6W5 498 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 MKI67P46013 3256 aaKnown RBP11.89□□□□□ -0.51
DDR1-227ENST00000376570 DOCK3Q8IZD9 2030 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 ABLIM1O14639 778 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 CRYBB1P53674 252 aaPredicted RBP11.89□□□□□ -0.51
DDR1-227ENST00000376570 SLC5A3P53794 718 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 FCGRTP55899 365 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 SEMA5AQ13591 1074 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 CYTH1Q15438 398 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 PLEKHG4Q58EX7 1191 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 PPHLN1Q8NEY8 458 aaKnown RBP11.89□□□□□ -0.51
DDR1-227ENST00000376570 KBTBD7Q8WVZ9 684 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 USP29Q9HBJ7 922 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 DMAP1Q9NPF5 467 aaPredicted RBP11.89□□□□□ -0.51
DDR1-227ENST00000376570 TMLHEQ9NVH6 421 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 GMIPQ9P107 970 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 IGKV6-21A0A0C4DH24 114 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 ATP6V1B1P15313 513 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 RGMBQ6NW40 437 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 TRIM42Q8IWZ5 723 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 LGI2Q8N0V4 545 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 PLD6Q8N2A8 252 aaKnown RBP11.89□□□□□ -0.51
DDR1-227ENST00000376570 TTC39CQ8N584 583 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 CD99L2Q8TCZ2 262 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 VPS39Q96JC1 886 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 FOXP3Q9BZS1 431 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 DENND2DQ9H6A0 471 aaPredicted RBP11.89□□□□□ -0.51
DDR1-227ENST00000376570 CCDC167Q9P0B6 97 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 DNAJC25-GNG10A0A024R161 153 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 PTGESO14684 152 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 TP73O15350 636 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 FAM189A1O60320 539 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 SORBS2O94875 1100 aaKnown RBP11.88□□□□□ -0.51
DDR1-227ENST00000376570 CHRM3P20309 590 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 DSC2Q02487 901 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 ZBTB17Q13105 803 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 KHDC1Q4VXA5 237 aaKnown RBP11.88□□□□□ -0.51
DDR1-227ENST00000376570 LACTB2Q53H82 288 aaPredicted RBP11.88□□□□□ -0.51
DDR1-227ENST00000376570 AGGF1Q8N302 714 aaeCLIP11.88□□□□□ -0.515e-7■■■■■ 43.7
DDR1-227ENST00000376570 TDRD5Q8NAT2 981 aaKnown RBP11.88□□□□□ -0.51
DDR1-227ENST00000376570 UCMAQ8WVF2 138 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 ZBED2Q9BTP6 218 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 PMM2O15305 246 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 CHADO15335 359 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 GUCA1CO95843 209 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 C2P06681 752 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 TBX4P57082 545 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 SLC26A9Q7LBE3 791 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 ZBTB46Q86UZ6 589 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 CCDC117Q8IWD4 279 aaPredicted RBP11.88□□□□□ -0.51
DDR1-227ENST00000376570 CARNMT1Q8N4J0 409 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 SMG8Q8ND04 991 aaKnown RBP11.88□□□□□ -0.51
DDR1-227ENST00000376570 SH3GL3Q99963 347 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 ZNF670Q9BS34 389 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 ALG9Q9H6U8 611 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 GPAMQ9HCL2 828 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 GKN1Q9NS71 199 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 TAF1LQ8IZX4 1826 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 ARFGEF1Q9Y6D6 1849 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 KATNA1O75449 491 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 GJB3O75712 270 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 LHX1P48742 406 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 IRX1P78414 480 aaPredicted RBP11.88□□□□□ -0.51
DDR1-227ENST00000376570 GRM3Q14832 879 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 CGB2Q6NT52 195 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 NPWQ8N729 165 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 SCG3Q8WXD2 468 aaKnown RBP11.88□□□□□ -0.51
DDR1-227ENST00000376570 RNPEPL1Q9HAU8 725 aa11.88□□□□□ -0.51
DDR1-227ENST00000376570 XPO1O14980 1071 aaKnown RBP11.87□□□□□ -0.51
DDR1-227ENST00000376570 GABBR2O75899 941 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 GJA1P17302 382 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 CALB2P22676 271 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 IL4RP24394 825 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 GCAP28676 217 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 GP5P40197 560 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 TAF10Q12962 218 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 ITGA7Q13683 1181 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 PITRM1Q5JRX3 1037 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 PDPK2PQ6A1A2 396 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 ADGRD1Q6QNK2 874 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 SNX32Q86XE0 403 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 ACVR1CQ8NER5 493 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 STK32AQ8WU08 396 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 CENPTQ96BT3 561 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 MS4A4AQ96JQ5 239 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 SEMA6AQ9H2E6 1030 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 THEGQ9P2T0 379 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 GIMAP2Q9UG22 337 aa11.87□□□□□ -0.51
DDR1-227ENST00000376570 SMIM35A0A1B0GVV1 85 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms