RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 FSCBQ5H9T9 825 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 SLFN12LQ6IEE8 588 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 LLGL2Q6P1M3 1020 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 TMEM270Q6UE05 265 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 SLC26A11Q86WA9 606 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 APBB2Q92870 758 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 SLC13A1Q9BZW2 595 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 CDT1Q9H211 546 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 C1orf112Q9NSG2 853 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 J3QRK9 145 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 NOL3O60936 208 aaKnown RBP12.38□□□□□ -0.43
C9orf3-203ENST00000375315 ATE1O95260 518 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 COX4I1P13073 169 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 POLR2EP19388 210 aaKnown RBP12.38□□□□□ -0.43
C9orf3-203ENST00000375315 RAP1GAPP47736 663 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 PSEN2P49810 448 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 NOGQ13253 232 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 DPYSQ14117 519 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 CES4AQ5XG92 561 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 SETD3Q86TU7 594 aaPredicted RBP12.38□□□□□ -0.43
C9orf3-203ENST00000375315 KBTBD7Q8WVZ9 684 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 FBXL8Q96CD0 374 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 MFSD14AQ96MC6 490 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 C20orf27Q9GZN8 174 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 KLHL25Q9H0H3 589 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 SEPT3Q9UH03 358 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 KLHL3Q9UH77 587 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 ACKR2O00590 384 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 CYB561D2O14569 222 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 SPAG6O75602 509 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 CAPNS1P04632 268 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 GAD2Q05329 585 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 CACNB2Q08289 660 aaPredicted RBP12.38□□□□□ -0.43
C9orf3-203ENST00000375315 ANKRD22Q5VYY1 191 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 MFSD14CQ5VZR4 134 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 C16orf89Q6UX73 402 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 ZNF467Q7Z7K2 595 aaPredicted RBP12.38□□□□□ -0.43
C9orf3-203ENST00000375315 USP37Q86T82 979 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 CARM1Q86X55 608 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 LILRA2Q8N149 483 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 SDR16C5Q8N3Y7 309 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 CPT1BQ92523 772 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 NKD2Q969F2 451 aaPredicted RBP12.38□□□□□ -0.43
C9orf3-203ENST00000375315 SH3GL1Q99961 368 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 TMEM121Q9BTD3 319 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 TDRD1Q9BXT4 1180 aaKnown RBP12.38□□□□□ -0.43
C9orf3-203ENST00000375315 RPF2Q9H7B2 306 aaKnown RBP12.38□□□□□ -0.43
C9orf3-203ENST00000375315 CDC14AQ9UNH5 594 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 PCDHB4Q9Y5E5 795 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 SLC30A1Q9Y6M5 507 aa12.38□□□□□ -0.43
C9orf3-203ENST00000375315 IGKV6-21A0A0C4DH24 114 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 TCRBV9S1A1TA0A576 114 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 PI4K2BG5E9Z4 385 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 STAG3L1P0CL83 205 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 NELFEP18615 380 aaKnown RBP12.37□□□□□ -0.43
C9orf3-203ENST00000375315 CDH8P55286 799 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 CDH15P55291 814 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 NRF1Q16656 503 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 LIN9Q5TKA1 542 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 CYP2U1Q7Z449 544 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 CTAGE3PQ8IX95 158 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 GRIN3AQ8TCU5 1115 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 PTCD2Q8WV60 388 aaKnown RBP12.37□□□□□ -0.43
C9orf3-203ENST00000375315 TMEM40Q8WWA1 233 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 HPS1Q92902 700 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 MRPL46Q9H2W6 279 aaKnown RBP12.37□□□□□ -0.43
C9orf3-203ENST00000375315 RPF1Q9H9Y2 349 aaKnown RBP12.37□□□□□ -0.43
C9orf3-203ENST00000375315 CXorf21Q9HAI6 301 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 OLAHQ9NV23 265 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 CACNG4Q9UBN1 327 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 DAPK2Q9UIK4 370 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 PIN4Q9Y237 131 aaKnown RBP12.37□□□□□ -0.43
C9orf3-203ENST00000375315 TRIP12Q14669 1992 aaPredicted RBP12.37□□□□□ -0.43
C9orf3-203ENST00000375315 ADGRA2Q96PE1 1338 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 PRSS51A0A1B0GVH4 220 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 A0A1W2PPW3 197 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 OGTO15294 1046 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 VNN1O95497 513 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 KRT1P04264 644 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 S100BP04271 92 aaPredicted RBP12.37□□□□□ -0.43
C9orf3-203ENST00000375315 NFICP08651 508 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 AKR1A1P14550 325 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 PEX6Q13608 980 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 ZCCHC23Q6ZST2 131 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 C12orf56Q8IXR9 622 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 NAT8LQ8N9F0 302 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 RAET1EQ8TD07 263 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 ZNF597Q96LX8 424 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 WDR83Q9BRX9 315 aaKnown RBP12.37□□□□□ -0.43
C9orf3-203ENST00000375315 DNAJC28Q9NX36 388 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 MKS1Q9NXB0 559 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 PLXNA1Q9UIW2 1896 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 H3BMQ9 156 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 ZMPSTE24O75844 475 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 FAM155BO75949 473 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 CFHP08603 1231 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 TRPC1P48995 793 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 GPC3P51654 580 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 BNIP3Q12983 259 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 PPP2R5DQ14738 602 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms