RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 PPP4R4Q6NUP7 873 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 SERPINA13PQ6UXR4 307 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 KCTD20Q7Z5Y7 419 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 SRGAP1Q7Z6B7 1085 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 TICAM2Q86XR7 235 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 RAB11FIP4Q86YS3 637 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 TBC1D10CQ8IV04 446 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 SAMD14Q8IZD0 417 aaPredicted RBP5.04□□□□□ -1.6
PMS1-202ENST00000374826 GALNT16Q8N428 558 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 RUFY2Q8WXA3 655 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 BRI3BPQ8WY22 251 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 MMS19Q96T76 1030 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 VN1R3Q9BXE9 311 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 TRIM5Q9C035 493 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 GOLGA6AQ9NYA3 693 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 COL20A1Q9P218 1284 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 AMFRQ9UKV5 643 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 USP22Q9UPT9 525 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 DRG1Q9Y295 367 aaKnown RBP5.04□□□□□ -1.6
PMS1-202ENST00000374826 AFG3L2Q9Y4W6 797 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 ZHX2Q9Y6X8 837 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 PLIN4Q96Q06 1357 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 MYH15Q9Y2K3 1946 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 CENPFP49454 3210 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 NEDD4P46934 1319 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 BTBD19C9JJ37 291 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 RRP9O43818 475 aaKnown RBP5.03□□□□□ -1.6
PMS1-202ENST00000374826 USP1O94782 785 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 FGAP02671 866 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 SLC3A2P08195 630 aaKnown RBP5.03□□□□□ -1.6
PMS1-202ENST00000374826 HSPA8P11142 646 aaKnown RBP5.03□□□□□ -1.6
PMS1-202ENST00000374826 CETPP11597 493 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 MYF5P13349 255 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 UQCRC1P31930 480 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 PTDSS1P48651 473 aaKnown RBP5.03□□□□□ -1.6
PMS1-202ENST00000374826 ALDH5A1P51649 535 aaPredicted RBP5.03□□□□□ -1.6
PMS1-202ENST00000374826 ITGA8P53708 1063 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 FAM193AP78312 1265 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 PSG6Q00889 435 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 FMO1Q01740 532 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 ICA1Q05084 483 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 RAPGEF1Q13905 1077 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 ARHGEF7Q14155 803 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 GBX1Q14549 363 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 GRM3Q14832 879 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 RABEP1Q15276 862 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 TRIP6Q15654 476 aaKnown RBP5.03□□□□□ -1.6
PMS1-202ENST00000374826 ALX1Q15699 326 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 KIAA0753Q2KHM9 967 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 GFOD2Q3B7J2 385 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 PXDC1Q5TGL8 231 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 DARS2Q6PI48 645 aaKnown RBP5.03□□□□□ -1.6
PMS1-202ENST00000374826 TMEM179Q6ZVK1 233 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 CHST15Q7LFX5 561 aaPredicted RBP5.03□□□□□ -1.6
PMS1-202ENST00000374826 SFTPA1Q8IWL2 248 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 ACER1Q8TDN7 264 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 APIPQ96GX9 242 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 C5orf34Q96MH7 638 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 AS3MTQ9HBK9 375 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 ZNF287Q9HBT7 754 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 RNF186Q9NXI6 227 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 MID2Q9UJV3 735 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.03□□□□□ -1.6
PMS1-202ENST00000374826 TRIP12Q14669 1992 aaPredicted RBP5.03□□□□□ -1.6
PMS1-202ENST00000374826 LOXHD1Q8IVV2 1947 aa5.03□□□□□ -1.6
PMS1-202ENST00000374826 FRMPD2Q68DX3 1309 aaPredicted RBP5.02□□□□□ -1.61
PMS1-202ENST00000374826 CNTNAP2Q9UHC6 1331 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 A0A1W2PRG0 241 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 TSPY2A6NKD2 308 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 M0R3H8 397 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 PDHXO00330 501 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 CXCL11O14625 94 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 MGEA5O60502 916 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 RANBP6O60518 1105 aaKnown RBP5.02□□□□□ -1.61
PMS1-202ENST00000374826 NMT2O60551 498 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 PIAS2O75928 621 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 HRGP04196 525 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 CHRM5P08912 532 aaPredicted RBP5.02□□□□□ -1.61
PMS1-202ENST00000374826 TSPY3P0CV98 308 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 TSPY8P0CW00 308 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 ACVR2AP27037 513 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 PEX2P28328 305 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 TM4SF4P48230 202 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 CTCFP49711 727 aaPredicted RBP5.02□□□□□ -1.61
PMS1-202ENST00000374826 LBX1P52954 281 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 TIRAPP58753 221 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 TIAL1Q01085 375 aaKnown RBP eCLIP5.02□□□□□ -1.613e-9■■■■■ 32.4
PMS1-202ENST00000374826 SLC29A2Q14542 456 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 IMMTQ16891 758 aaKnown RBP5.02□□□□□ -1.61
PMS1-202ENST00000374826 ZNF750Q32MQ0 723 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 CASC1Q6TDU7 716 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 PTCHD4Q6ZW05 846 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 BCDIN3DQ7Z5W3 292 aaKnown RBP5.02□□□□□ -1.61
PMS1-202ENST00000374826 SESTD1Q86VW0 696 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 ZNF444Q8N0Y2 327 aaPredicted RBP5.02□□□□□ -1.61
PMS1-202ENST00000374826 SPICE1Q8N0Z3 855 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 SMCR8Q8TEV9 937 aaPredicted RBP5.02□□□□□ -1.61
PMS1-202ENST00000374826 CCDC17Q96LX7 622 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 PDGFCQ9NRA1 345 aa5.02□□□□□ -1.61
PMS1-202ENST00000374826 ASIC5Q9NY37 505 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms