RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 MYO19Q96H55 970 aa15.37■□□□□ 0.05
HSPG2-201ENST00000374673 MRGPRX3Q96LB0 322 aa15.37■□□□□ 0.05
HSPG2-201ENST00000374673 ACOX2Q99424 681 aa15.37■□□□□ 0.05
HSPG2-201ENST00000374673 GABRG3Q99928 467 aa15.37■□□□□ 0.05
HSPG2-201ENST00000374673 SLC39A8Q9C0K1 460 aa15.37■□□□□ 0.05
HSPG2-201ENST00000374673 ZDHHC4Q9NPG8 344 aa15.37■□□□□ 0.05
HSPG2-201ENST00000374673 TRMT1Q9NXH9 659 aaKnown RBP15.37■□□□□ 0.05
HSPG2-201ENST00000374673 VPS51Q9UID3 782 aa15.37■□□□□ 0.05
HSPG2-201ENST00000374673 SLC25A13Q9UJS0 675 aa15.37■□□□□ 0.05
HSPG2-201ENST00000374673 PACSIN2Q9UNF0 486 aaPredicted RBP15.37■□□□□ 0.05
HSPG2-201ENST00000374673 PLA2G4CQ9UP65 541 aa15.37■□□□□ 0.05
HSPG2-201ENST00000374673 MFHAS1Q9Y4C4 1052 aa15.37■□□□□ 0.05
HSPG2-201ENST00000374673 A0A0C4DFX4 3053 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 ARHGAP42A6NI28 874 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 SGK1O00141 431 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 KDELR3O43731 214 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 SNAP91O60641 907 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 ADAM23O75077 832 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 NUMBP49757 651 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 COPS2P61201 443 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 ST8SIA6P61647 398 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 ARF5P84085 180 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 SERINC3Q13530 473 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 PPP2R5EQ16537 467 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 TFDP3Q5H9I0 405 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 MEI1Q5TIA1 1274 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 SLC9A4Q6AI14 798 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 CCDC33Q8N5R6 958 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 ALG3Q92685 438 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 HMCESQ96FZ2 354 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 CELF6Q96J87 481 aaKnown RBP15.36■□□□□ 0.05
HSPG2-201ENST00000374673 LRFN3Q9BTN0 628 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 SPON2Q9BUD6 331 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 TMEM245Q9H330 911 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 KCND1Q9NSA2 647 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 CACNA2D2Q9NY47 1150 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 HS3ST2Q9Y278 367 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 STON1Q9Y6Q2 735 aa15.36■□□□□ 0.05
HSPG2-201ENST00000374673 hCG_1818297A0A087WSY0 165 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 USP27XA6NNY8 438 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 CBX4O00257 560 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 MFSD11O43934 449 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 PAPSS2O95340 614 aaPredicted RBP15.35■□□□□ 0.05
HSPG2-201ENST00000374673 GLDCP23378 1020 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 PTPN7P35236 360 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 NNMTP40261 264 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 CCR3P51677 355 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 NUBP1P53384 320 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 SLC20A2Q08357 652 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 FNDC3BQ53EP0 1204 aaKnown RBP15.35■□□□□ 0.05
HSPG2-201ENST00000374673 SDE2Q6IQ49 451 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 RETSATQ6NUM9 610 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 SERPINA13PQ6UXR4 307 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 RFX6Q8HWS3 928 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 CCDC50Q8IVM0 306 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 PLD5Q8N7P1 536 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 DTWD2Q8NBA8 298 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.35■□□□□ 0.05
HSPG2-201ENST00000374673 RPL10LQ96L21 214 aaKnown RBP15.35■□□□□ 0.05
HSPG2-201ENST00000374673 MAK16Q9BXY0 300 aaKnown RBP15.35■□□□□ 0.05
HSPG2-201ENST00000374673 HPCAL4Q9UM19 191 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 EFR3BQ9Y2G0 817 aa15.35■□□□□ 0.05
HSPG2-201ENST00000374673 ZSCAN5CA6NGD5 496 aaPredicted RBP15.34■□□□□ 0.05
HSPG2-201ENST00000374673 WASH3PC4AMC7 463 aa15.34■□□□□ 0.05
HSPG2-201ENST00000374673 APOL1O14791 398 aa15.34■□□□□ 0.05
HSPG2-201ENST00000374673 ATP9BO43861 1147 aa15.34■□□□□ 0.05
HSPG2-201ENST00000374673 SRCP12931 536 aa15.34■□□□□ 0.05
HSPG2-201ENST00000374673 HOXB2P14652 356 aa15.34■□□□□ 0.05
HSPG2-201ENST00000374673 ZFXP17010 805 aaPredicted RBP15.34■□□□□ 0.05
HSPG2-201ENST00000374673 PRKCHP24723 683 aa15.34■□□□□ 0.05
HSPG2-201ENST00000374673 WASP42768 502 aa15.34■□□□□ 0.05
HSPG2-201ENST00000374673 CXCL12P48061 93 aa15.34■□□□□ 0.05
HSPG2-201ENST00000374673 STK19P49842 368 aaPredicted RBP15.34■□□□□ 0.05
HSPG2-201ENST00000374673 PAPOLAP51003 745 aaKnown RBP15.34■□□□□ 0.05
HSPG2-201ENST00000374673 CLCN6P51797 869 aa15.34■□□□□ 0.05
HSPG2-201ENST00000374673 GEMIN4P57678 1058 aaKnown RBP15.34■□□□□ 0.05
HSPG2-201ENST00000374673 TFDP2Q14188 446 aa15.34■□□□□ 0.05
HSPG2-201ENST00000374673 CRY1Q16526 586 aa15.34■□□□□ 0.05
HSPG2-201ENST00000374673 ZNF354CQ86Y25 554 aa15.34■□□□□ 0.05
HSPG2-201ENST00000374673 TP53INP2Q8IXH6 220 aa15.34■□□□□ 0.05
HSPG2-201ENST00000374673 SH2D3CQ8N5H7 860 aa15.34■□□□□ 0.05
HSPG2-201ENST00000374673 PRMT8Q9NR22 394 aaPredicted RBP15.34■□□□□ 0.05
HSPG2-201ENST00000374673 SPATA6Q9NWH7 488 aaPredicted RBP15.34■□□□□ 0.05
HSPG2-201ENST00000374673 C2orf42Q9NWW7 574 aa15.34■□□□□ 0.05
HSPG2-201ENST00000374673 SLCO3A1Q9UIG8 710 aa15.34■□□□□ 0.05
HSPG2-201ENST00000374673 SHROOM3Q8TF72 1996 aa15.34■□□□□ 0.05
HSPG2-201ENST00000374673 DFFAO00273 331 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 KIF5CO60282 957 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 CD160O95971 181 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 PYGMP11217 842 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 KRT10P13645 584 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 HLA-EP13747 358 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 CETN2P41208 172 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 SERPINH1P50454 418 aaKnown RBP15.33■□□□□ 0.04
HSPG2-201ENST00000374673 SATB1Q01826 763 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 RPS6KA1Q15418 735 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 HNRNPA1L2Q32P51 320 aaKnown RBP15.33■□□□□ 0.04
HSPG2-201ENST00000374673 HS1BP3Q53T59 392 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 DCAF12L1Q5VU92 463 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 TMEM92Q6UXU6 159 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms