RNA–Protein interactions for RNA: ENST00000373795.6

SRSF4-201, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRSF4, Length 2,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-201ENST00000373795 PCDHB5Q9Y5E4 795 aa20.52■□□□□ 0.88
SRSF4-201ENST00000373795 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.51■□□□□ 0.87
SRSF4-201ENST00000373795 DFFAO00273 331 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 SYN3O14994 580 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 TOP3BO95985 862 aaKnown RBP20.51■□□□□ 0.87
SRSF4-201ENST00000373795 IL1BP01584 269 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 COL6A1P12109 1028 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 MLNP12872 115 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 MRPL58Q14197 206 aaKnown RBP20.51■□□□□ 0.87
SRSF4-201ENST00000373795 ARTNQ5T4W7 220 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 LGSNQ5TDP6 509 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 TAS1R1Q7RTX1 841 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 CRISPLD1Q9H336 500 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 ELAC1Q9H777 363 aaKnown RBP20.51■□□□□ 0.87
SRSF4-201ENST00000373795 SYBUQ9NX95 663 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 MOCS1Q9NZB8 636 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 RAD54BQ9Y620 910 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.51■□□□□ 0.87
SRSF4-201ENST00000373795 TBX18O95935 607 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 JCHAINP01591 159 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 ESRRAP11474 423 aaPredicted RBP20.51■□□□□ 0.87
SRSF4-201ENST00000373795 MX2P20592 715 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 SERPINB6P35237 376 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 CHI3L2Q15782 390 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 C14orf80Q86SX3 495 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 ZSCAN18Q8TBC5 510 aaPredicted RBP20.51■□□□□ 0.87
SRSF4-201ENST00000373795 USP33Q8TEY7 942 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 E2F7Q96AV8 911 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 FUBP3Q96I24 572 aaKnown RBP eCLIP20.51■□□□□ 0.87
SRSF4-201ENST00000373795 HAPLN3Q96S86 360 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 UBP1Q9NZI7 540 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 MPP6Q9NZW5 540 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 GMIPQ9P107 970 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 MAGED2Q9UNF1 606 aaPredicted RBP20.51■□□□□ 0.87
SRSF4-201ENST00000373795 RPL26L1Q9UNX3 145 aaKnown RBP20.51■□□□□ 0.87
SRSF4-201ENST00000373795 SCML2Q9UQR0 700 aa20.51■□□□□ 0.87
SRSF4-201ENST00000373795 FAM159BA6NKW6 160 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 KITP10721 976 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 CCNFP41002 786 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 CPA2P48052 419 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 TEX44Q53QW1 395 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 RTP2Q5QGT7 225 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 MON1AQ86VX9 555 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 ARID3BQ8IVW6 561 aaPredicted RBP20.5■□□□□ 0.87
SRSF4-201ENST00000373795 SEPT8Q92599 483 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 C8orf48Q96LL4 319 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 DCLRE1BQ9H816 532 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 DONSONQ9NYP3 566 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 MARCOQ9UEW3 520 aaPredicted RBP20.5■□□□□ 0.87
SRSF4-201ENST00000373795 BPTFQ12830 3046 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 KRT38O76015 456 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 NFKB1P19838 968 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 SESN3P58005 492 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 KPNB1Q14974 876 aaKnown RBP20.5■□□□□ 0.87
SRSF4-201ENST00000373795 KRT72Q14CN4 511 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 BRMS1LQ5PSV4 323 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.5■□□□□ 0.876e-6■■■■■ 27.3
SRSF4-201ENST00000373795 CRIPAKQ8N1N5 446 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.5■□□□□ 0.874e-14■□□□□ 9.8
SRSF4-201ENST00000373795 APOL2Q9BQE5 337 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 HS3ST4Q9Y661 456 aa20.5■□□□□ 0.87
SRSF4-201ENST00000373795 TBKBP1A7MCY6 615 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 KCNU1A8MYU2 1149 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 SKAP2O75563 359 aaPredicted RBP20.49■□□□□ 0.87
SRSF4-201ENST00000373795 GSTA2P09210 222 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 FGFR3P22607 806 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 PAX7P23759 505 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 ZNF135P52742 658 aaPredicted RBP20.49■□□□□ 0.87
SRSF4-201ENST00000373795 ARHGEF6Q15052 776 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 ACSBG2Q5FVE4 666 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 RNF19BQ6ZMZ0 732 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 NUDCD3Q8IVD9 361 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 NDUFAF2Q8N183 169 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 DPF3Q92784 378 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 MCUR1Q96AQ8 359 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 MLPHQ9BV36 600 aaPredicted RBP20.49■□□□□ 0.87
SRSF4-201ENST00000373795 C20orf27Q9GZN8 174 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 SIRPGQ9P1W8 387 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 CPB1P15086 417 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 CYP2C18P33260 490 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 TUBP50607 506 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 FUT10Q6P4F1 479 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 OTOP3Q7RTS5 596 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 ARHGAP12Q8IWW6 846 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 CNTD1Q8N815 330 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 WDR60Q8WVS4 1066 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 C7orf26Q96N11 449 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 PPP1R12CQ9BZL4 782 aa20.49■□□□□ 0.87
SRSF4-201ENST00000373795 VNN2O95498 520 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 GALTP07902 379 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 IRX4P78413 519 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 OCRLQ01968 901 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 PPP2R5DQ14738 602 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 ZNF280DQ6N043 979 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 DEFB128Q7Z7B8 93 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 TREML1Q86YW5 311 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 BCL7CQ8WUZ0 217 aaPredicted RBP20.48■□□□□ 0.87
SRSF4-201ENST00000373795 ZNF419Q96HQ0 510 aaPredicted RBP20.48■□□□□ 0.87
SRSF4-201ENST00000373795 TEKT5Q96M29 485 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 ANKRD27Q96NW4 1050 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms