RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 URGCPQ8TCY9 931 aa17.41■□□□□ 0.38
VEGFA-205ENST00000372067 RAET1EQ8TD07 263 aa17.41■□□□□ 0.38
VEGFA-205ENST00000372067 C10orf82Q8WW14 230 aa17.41■□□□□ 0.38
VEGFA-205ENST00000372067 SREK1Q8WXA9 508 aaKnown RBP17.41■□□□□ 0.38
VEGFA-205ENST00000372067 PABPC5Q96DU9 382 aaKnown RBP17.41■□□□□ 0.38
VEGFA-205ENST00000372067 RTP4Q96DX8 246 aa17.41■□□□□ 0.38
VEGFA-205ENST00000372067 SENP6Q9GZR1 1112 aaPredicted RBP17.41■□□□□ 0.38
VEGFA-205ENST00000372067 VCXQ9H320 206 aa17.41■□□□□ 0.38
VEGFA-205ENST00000372067 TMLHEQ9NVH6 421 aa17.41■□□□□ 0.38
VEGFA-205ENST00000372067 NMRK1Q9NWW6 199 aa17.41■□□□□ 0.38
VEGFA-205ENST00000372067 MPP6Q9NZW5 540 aa17.41■□□□□ 0.38
VEGFA-205ENST00000372067 RCOR3Q9P2K3 495 aaPredicted RBP17.41■□□□□ 0.38
VEGFA-205ENST00000372067 TLK1Q9UKI8 766 aa17.41■□□□□ 0.38
VEGFA-205ENST00000372067 PSAT1Q9Y617 370 aa17.41■□□□□ 0.38
VEGFA-205ENST00000372067 DGKIO75912 1065 aa17.4■□□□□ 0.38
VEGFA-205ENST00000372067 AVPR1AP37288 418 aa17.4■□□□□ 0.38
VEGFA-205ENST00000372067 C4orf50Q6ZRC1 276 aa17.4■□□□□ 0.38
VEGFA-205ENST00000372067 RNF180Q86T96 592 aa17.4■□□□□ 0.38
VEGFA-205ENST00000372067 GSTCDQ8NEC7 633 aa17.4■□□□□ 0.38
VEGFA-205ENST00000372067 PRKAG3Q9UGI9 489 aa17.4■□□□□ 0.38
VEGFA-205ENST00000372067 SCOCQ9UIL1 159 aa17.4■□□□□ 0.38
VEGFA-205ENST00000372067 GABRDO14764 452 aa17.4■□□□□ 0.38
VEGFA-205ENST00000372067 TOMM70O94826 608 aa17.4■□□□□ 0.38
VEGFA-205ENST00000372067 GJA9P57773 515 aa17.4■□□□□ 0.38
VEGFA-205ENST00000372067 WASHC5Q12768 1159 aa17.4■□□□□ 0.38
VEGFA-205ENST00000372067 SERINC5Q86VE9 423 aa17.4■□□□□ 0.38
VEGFA-205ENST00000372067 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.4■□□□□ 0.381e-6■■■■■ 40.2
VEGFA-205ENST00000372067 MFSD3Q96ES6 412 aa17.4■□□□□ 0.38
VEGFA-205ENST00000372067 CERS2Q96G23 380 aa17.4■□□□□ 0.38
VEGFA-205ENST00000372067 ZNF333Q96JL9 665 aa17.4■□□□□ 0.38
VEGFA-205ENST00000372067 MTO1Q9Y2Z2 717 aaKnown RBP17.4■□□□□ 0.38
VEGFA-205ENST00000372067 LYPLA1O75608 230 aaPredicted RBP17.39■□□□□ 0.38
VEGFA-205ENST00000372067 CTGFP29279 349 aa17.39■□□□□ 0.38
VEGFA-205ENST00000372067 HOXD12P35452 270 aa17.39■□□□□ 0.38
VEGFA-205ENST00000372067 CDK16Q00536 496 aa17.39■□□□□ 0.38
VEGFA-205ENST00000372067 RASA2Q15283 850 aa17.39■□□□□ 0.38
VEGFA-205ENST00000372067 WDR75Q8IWA0 830 aaKnown RBP17.39■□□□□ 0.38
VEGFA-205ENST00000372067 RNF168Q8IYW5 571 aaPredicted RBP17.39■□□□□ 0.38
VEGFA-205ENST00000372067 SPATA22Q8NHS9 363 aa17.39■□□□□ 0.38
VEGFA-205ENST00000372067 TTC8Q8TAM2 541 aa17.39■□□□□ 0.38
VEGFA-205ENST00000372067 SEPT5Q99719 369 aaPredicted RBP17.39■□□□□ 0.38
VEGFA-205ENST00000372067 SHCBP1LQ9BZQ2 653 aa17.39■□□□□ 0.38
VEGFA-205ENST00000372067 CAB39LQ9H9S4 337 aa17.39■□□□□ 0.38
VEGFA-205ENST00000372067 ACSS2Q9NR19 701 aa17.39■□□□□ 0.38
VEGFA-205ENST00000372067 NCF2P19878 526 aaPredicted RBP17.39■□□□□ 0.37
VEGFA-205ENST00000372067 CA8P35219 290 aa17.39■□□□□ 0.37
VEGFA-205ENST00000372067 EFEMP1Q12805 493 aa17.39■□□□□ 0.37
VEGFA-205ENST00000372067 UPP1Q16831 310 aa17.39■□□□□ 0.37
VEGFA-205ENST00000372067 ALYREFQ86V81 257 aaKnown RBP17.39■□□□□ 0.37
VEGFA-205ENST00000372067 NPWQ8N729 165 aa17.39■□□□□ 0.37
VEGFA-205ENST00000372067 DHRS4Q9BTZ2 278 aa17.39■□□□□ 0.37
VEGFA-205ENST00000372067 TRPV6Q9H1D0 765 aa17.39■□□□□ 0.37
VEGFA-205ENST00000372067 SSU72Q9NP77 194 aaKnown RBP17.39■□□□□ 0.37
VEGFA-205ENST00000372067 ANLNQ9NQW6 1124 aa17.39■□□□□ 0.37
VEGFA-205ENST00000372067 ARHGEF37A1IGU5 675 aa17.39■□□□□ 0.37
VEGFA-205ENST00000372067 SPRP35270 261 aaPredicted RBP17.39■□□□□ 0.37
VEGFA-205ENST00000372067 XKR4Q5GH76 650 aa17.39■□□□□ 0.37
VEGFA-205ENST00000372067 GATA6Q92908 595 aa17.39■□□□□ 0.37
VEGFA-205ENST00000372067 FICDQ9BVA6 458 aa17.39■□□□□ 0.37
VEGFA-205ENST00000372067 CHRAC1Q9NRG0 131 aa17.39■□□□□ 0.37
VEGFA-205ENST00000372067 LRFN2Q9ULH4 789 aa17.39■□□□□ 0.37
VEGFA-205ENST00000372067 PDE4DIPQ5VU43 2346 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 FCHO1O14526 889 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 FYNP06241 537 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 ITGA2BP08514 1039 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 GSTA2P09210 222 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 PRKCHP24723 683 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 GLRBP48167 497 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 SLC5A3P53794 718 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 SLC12A2P55011 1212 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 MGAT5BQ3V5L5 792 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 ZNF534Q76KX8 674 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 TTC7BQ86TV6 843 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 OR10T2Q8NGX3 314 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 RSPH1Q8WYR4 309 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 SLC2A13Q96QE2 648 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 DNAJC16Q9Y2G8 782 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 NUP205Q92621 2012 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 LRRC37A2A6NM11 1700 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 HSPA4LO95757 839 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 SLC4A1P02730 911 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 ETFBP38117 255 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 GP5P40197 560 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 NEK3P51956 506 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 SLC18A1P54219 525 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 THOC5Q13769 683 aaKnown RBP17.38■□□□□ 0.37
VEGFA-205ENST00000372067 LPIN1Q14693 890 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 MAPRE1Q15691 268 aaKnown RBP17.38■□□□□ 0.37
VEGFA-205ENST00000372067 LRRTM3Q86VH5 581 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 TNS4Q8IZW8 715 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 PCSK9Q8NBP7 692 aaKnown RBP17.38■□□□□ 0.37
VEGFA-205ENST00000372067 B3GALT6Q96L58 329 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 AGAP2Q99490 1192 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 NAT9Q9BTE0 207 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 ZNF358Q9NW07 568 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 RBM22Q9NW64 420 aaKnown RBP eCLIP17.38■□□□□ 0.374e-11■■■■□ 26.1
VEGFA-205ENST00000372067 DSEQ9UL01 958 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 MAGEA13PA6NCF6 341 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 TRIM43BA6NCK2 446 aa17.38■□□□□ 0.37
VEGFA-205ENST00000372067 FAM159BA6NKW6 160 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms