RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 KHDC1Q4VXA5 237 aaKnown RBP11.98□□□□□ -0.49
PDE6C-201ENST00000371447 NXNQ6DKJ4 435 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 ATG14Q6ZNE5 492 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 RGS9BPQ6ZS82 235 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 RPS27LQ71UM5 84 aaKnown RBP11.98□□□□□ -0.49
PDE6C-201ENST00000371447 SLC41A1Q8IVJ1 513 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 EXT2Q93063 718 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 MARK4Q96L34 752 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 PNPLA8Q9NP80 782 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 NT5MQ9NPB1 228 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 EMCNQ9ULC0 261 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 GOLGA8CPA6NN73 597 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 CNTN5O94779 1100 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 HSPA4LO95757 839 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 AP2A1O95782 977 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 BAG2O95816 211 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 MT-CO1P00395 513 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 SERPINB6P35237 376 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 PGM1P36871 562 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 SERPINB9P50453 376 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 PLK1P53350 603 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 PRPSAP1Q14558 356 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 HSF5Q4G112 596 aaPredicted RBP11.98□□□□□ -0.49
PDE6C-201ENST00000371447 ZSCAN18Q8TBC5 510 aaPredicted RBP11.98□□□□□ -0.49
PDE6C-201ENST00000371447 CYP4F12Q9HCS2 524 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 CHST12Q9NRB3 414 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 TAS2R1Q9NYW7 299 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 GMIPQ9P107 970 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 ZNF180Q9UJW8 692 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 AURKAO14965 403 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 C2P06681 752 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 RALBP11234 206 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 CPA3P15088 417 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 RPL17P18621 184 aaKnown RBP11.97□□□□□ -0.49
PDE6C-201ENST00000371447 PTPN4P29074 926 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 CRHR1P34998 444 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 CLNS1AP54105 237 aaKnown RBP11.97□□□□□ -0.49
PDE6C-201ENST00000371447 ATN1P54259 1190 aaPredicted RBP11.97□□□□□ -0.49
PDE6C-201ENST00000371447 SLC25A3Q00325 362 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 GRM3Q14832 879 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 BHLHA9Q7RTU4 235 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 RYBPQ8N488 228 aaPredicted RBP11.97□□□□□ -0.49
PDE6C-201ENST00000371447 OR6P1Q8NGX9 317 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 CFAP61Q8NHU2 1237 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 ACBD6Q9BR61 282 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 NACA2Q9H009 215 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 LRMDAQ9H2I8 198 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 SSU72Q9NP77 194 aaKnown RBP11.97□□□□□ -0.49
PDE6C-201ENST00000371447 TLK1Q9UKI8 766 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 ACTL7AQ9Y615 435 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 PLIN3O60664 434 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 KRT36O76013 467 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 F9P00740 461 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 PDHA1P08559 390 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 TSHRP16473 764 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 CCR1P32246 355 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 PPIDQ08752 370 aaKnown RBP11.97□□□□□ -0.49
PDE6C-201ENST00000371447 PTPRCAPQ14761 206 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 LRRC36Q1X8D7 754 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 C10orf120Q5SQS8 335 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 RAP1GAP2Q684P5 730 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 RTN4RL1Q86UN2 441 aaPredicted RBP11.97□□□□□ -0.49
PDE6C-201ENST00000371447 WDR75Q8IWA0 830 aaKnown RBP11.97□□□□□ -0.49
PDE6C-201ENST00000371447 KCTD4Q8WVF5 259 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 WDR60Q8WVS4 1066 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 MTBPQ96DY7 904 aa11.97□□□□□ -0.49
PDE6C-201ENST00000371447 TSR3Q9UJK0 312 aaKnown RBP11.97□□□□□ -0.49
PDE6C-201ENST00000371447 HBS1LQ9Y450 684 aaKnown RBP11.97□□□□□ -0.49
PDE6C-201ENST00000371447 J3KR12 359 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 CCDC22O60826 627 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 CHRNGP07510 517 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 TSPAN8P19075 237 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 ARRB2P32121 409 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 PAPOLAP51003 745 aaKnown RBP11.96□□□□□ -0.49
PDE6C-201ENST00000371447 THOC5Q13769 683 aaKnown RBP11.96□□□□□ -0.49
PDE6C-201ENST00000371447 CTXN3Q4LDR2 81 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 SCD5Q86SK9 330 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 GLT1D1Q96MS3 346 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 PHACTR1Q9C0D0 580 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 WDR55Q9H6Y2 383 aaPredicted RBP11.96□□□□□ -0.49
PDE6C-201ENST00000371447 NOP53Q9NZM5 478 aaKnown RBP11.96□□□□□ -0.49
PDE6C-201ENST00000371447 PTCH2Q9Y6C5 1203 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 MYO7AQ13402 2215 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 TMEM88BA6NKF7 163 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 PDE5AO76074 875 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 SORBS2O94875 1100 aaKnown RBP11.96□□□□□ -0.49
PDE6C-201ENST00000371447 CD1EP15812 388 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 RPL9P32969 192 aaKnown RBP11.96□□□□□ -0.49
PDE6C-201ENST00000371447 CA8P35219 290 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 SPRP35270 261 aaPredicted RBP11.96□□□□□ -0.49
PDE6C-201ENST00000371447 MSX2P35548 267 aaPredicted RBP11.96□□□□□ -0.49
PDE6C-201ENST00000371447 MAGEA6P43360 314 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 RPL34P49207 117 aaKnown RBP11.96□□□□□ -0.49
PDE6C-201ENST00000371447 NIPAL4Q0D2K0 466 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 CTC1Q2NKJ3 1217 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 ITPRIPL1Q6GPH6 555 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 C4orf22Q6V702 233 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 LIMS2Q7Z4I7 341 aa11.96□□□□□ -0.49
PDE6C-201ENST00000371447 PTAR1Q7Z6K3 402 aaPredicted RBP11.96□□□□□ -0.49
PDE6C-201ENST00000371447 CHSY1Q86X52 802 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms