RNA–Protein interactions for RNA: ENST00000371039.5

SGIP1-204, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SGIP1, Length 4,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-204ENST00000371039 IYDQ6PHW0 289 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 C1orf228Q6PIY5 440 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 STXBP4Q6ZWJ1 553 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 NPAS4Q8IUM7 802 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 NUDCD3Q8IVD9 361 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 PELI3Q8N2H9 469 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 FIBCD1Q8N539 461 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 RNF169Q8NCN4 708 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 DTNBP1Q96EV8 351 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 MARK4Q96L34 752 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 AGAP2Q99490 1192 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 PRPF18Q99633 342 aaKnown RBP4.9□□□□□ -1.63
SGIP1-204ENST00000371039 CCT7Q99832 543 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 PORCNQ9H237 461 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 LHX5Q9H2C1 402 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 SLC52A3Q9NQ40 469 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 RAB6BQ9NRW1 208 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 FAIMQ9NVQ4 179 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 SLC9A2Q9UBY0 812 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 CPSF3Q9UKF6 684 aaKnown RBP4.9□□□□□ -1.63
SGIP1-204ENST00000371039 ITGB1BP2Q9UKP3 347 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 TMED5Q9Y3A6 229 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 MAFBQ9Y5Q3 323 aaPredicted RBP4.9□□□□□ -1.63
SGIP1-204ENST00000371039 OTOFQ9HC10 1997 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 ZCWPW2A0A1B0GU75 182 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 SOCS2O14508 198 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 B4GALT5O43286 388 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 KCNJ13O60928 360 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 CLASP2O75122 1294 aaKnown RBP4.9□□□□□ -1.63
SGIP1-204ENST00000371039 TRMUO75648 421 aaKnown RBP4.9□□□□□ -1.63
SGIP1-204ENST00000371039 TMCC1O94876 653 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 HNRNPCP07910 306 aaKnown RBP eCLIP4.9□□□□□ -1.63
SGIP1-204ENST00000371039 CD97P48960 835 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 TUFMP49411 452 aaKnown RBP4.9□□□□□ -1.63
SGIP1-204ENST00000371039 PKNOX1P55347 436 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 PITX1P78337 314 aaPredicted RBP4.9□□□□□ -1.63
SGIP1-204ENST00000371039 IFITM3Q01628 133 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 CETN1Q12798 172 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 DMP1Q13316 513 aaPredicted RBP4.9□□□□□ -1.63
SGIP1-204ENST00000371039 HIC1Q14526 733 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 SURF1Q15526 300 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 PDPK2PQ6A1A2 396 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 DARS2Q6PI48 645 aaKnown RBP4.9□□□□□ -1.63
SGIP1-204ENST00000371039 CES3Q6UWW8 571 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 CYS1Q717R9 158 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 BNIPLQ7Z465 357 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 PIGZQ86VD9 579 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 DSELQ8IZU8 1212 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 PNPLA1Q8N8W4 532 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 SNX31Q8N9S9 440 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 ADAMTS16Q8TE57 1224 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 STMN2Q93045 179 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 PPP1R10Q96QC0 940 aaKnown RBP4.9□□□□□ -1.63
SGIP1-204ENST00000371039 PLVAPQ9BX97 442 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 WWP1Q9H0M0 922 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 PCDHAC1Q9H158 963 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 COPS7BQ9H9Q2 264 aaPredicted RBP4.9□□□□□ -1.63
SGIP1-204ENST00000371039 CAB39LQ9H9S4 337 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 PLEKHA5Q9HAU0 1116 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 PCDH18Q9HCL0 1135 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.9□□□□□ -1.63
SGIP1-204ENST00000371039 DKK3Q9UBP4 350 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 CD300AQ9UGN4 299 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 ZC3H7BQ9UGR2 993 aaKnown RBP4.9□□□□□ -1.63
SGIP1-204ENST00000371039 ZDHHC2Q9UIJ5 367 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 RIMKLBQ9ULI2 386 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 PCDHA11Q9Y5I1 949 aa4.9□□□□□ -1.63
SGIP1-204ENST00000371039 DICER1Q9UPY3 1922 aaKnown RBP4.89□□□□□ -1.63
SGIP1-204ENST00000371039 IQANK1A0A1B0GTG1 560 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 CLRN2A0PK11 232 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 BCLAF3A2AJT9 711 aaKnown RBP4.89□□□□□ -1.63
SGIP1-204ENST00000371039 WDR27A2RRH5 827 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 F5H423 210 aaPredicted RBP4.89□□□□□ -1.63
SGIP1-204ENST00000371039 H3BNH8 94 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 MATN2O00339 956 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 ACOX3O15254 700 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 KLHL41O60662 606 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 DKC1O60832 514 aaKnown RBP eCLIP4.89□□□□□ -1.63
SGIP1-204ENST00000371039 DGKIO75912 1065 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 PCNAP12004 261 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 MPSTP25325 297 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 ATXN3P54252 364 aaPredicted RBP4.89□□□□□ -1.63
SGIP1-204ENST00000371039 CAMK2BQ13554 666 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 DCAF6Q58WW2 860 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 LAIR2Q6ISS4 152 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 SWSAP1Q6NVH7 229 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 DNAJC24Q6P3W2 148 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 POTEHQ6S545 545 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 MILR1Q7Z6M3 343 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 THNSL1Q8IYQ7 743 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 PYROXD2Q8N2H3 581 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 CPSF7Q8N684 471 aaKnown RBP4.89□□□□□ -1.63
SGIP1-204ENST00000371039 C1orf127Q8N9H9 656 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 BRSK1Q8TDC3 778 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 ATP6V1E2Q96A05 226 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 MAML3Q96JK9 1138 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 RPL10LQ96L21 214 aaKnown RBP4.89□□□□□ -1.63
SGIP1-204ENST00000371039 C8orf48Q96LL4 319 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 ALPK1Q96QP1 1244 aa4.89□□□□□ -1.63
SGIP1-204ENST00000371039 XPNPEP3Q9NQH7 507 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms