RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 LNPEPQ9UIQ6 1025 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 CRTAMO95727 393 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 RXRBP28702 533 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 GABRB2P47870 512 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 GJA9P57773 515 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.89□□□□□ -0.35
GPC4-201ENST00000370828 ZC3H12AQ5D1E8 599 aaKnown RBP12.89□□□□□ -0.35
GPC4-201ENST00000370828 SCARA3Q6AZY7 606 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 CDC42EP5Q6NZY7 148 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 DPP9Q86TI2 863 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 PM20D2Q8IYS1 436 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 UGT2B28Q9BY64 529 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 VPS45Q9NRW7 570 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 DNAJC11Q9NVH1 559 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 NUDT5Q9UKK9 219 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 PMF1-BGLAPU3KQ54 211 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 GPR75-ASB3A0A0A6YYF3 556 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 ATP6AP2A0A1C7CYW4 349 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 H0YGN5 161 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 TNPO2O14787 897 aaKnown RBP12.89□□□□□ -0.35
GPC4-201ENST00000370828 CHADO15335 359 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 ATP6AP2O75787 350 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 PDE9AO76083 593 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 ZFP69Q49AA0 526 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 TYW3Q6IPR3 259 aaKnown RBP12.89□□□□□ -0.35
GPC4-201ENST00000370828 DENND5AQ6IQ26 1287 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 MCFD2Q8NI22 146 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 ZNF285Q96NJ3 590 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 OMDQ99983 421 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 PDCD10Q9BUL8 212 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 FBXO28Q9NVF7 368 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 CDH9Q9ULB4 789 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 SCAF8Q9UPN6 1271 aaKnown RBP12.89□□□□□ -0.35
GPC4-201ENST00000370828 NFS1Q9Y697 457 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 FAM149AA5PLN7 773 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 OR6B1O95007 311 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 NCAM1P13591 858 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 NUMBP49757 651 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 PRKAA2P54646 552 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 DPYSQ14117 519 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 SPOUT1Q5T280 376 aaKnown RBP12.89□□□□□ -0.35
GPC4-201ENST00000370828 FNDC5Q8NAU1 212 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 BLOC1S5Q8TDH9 187 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 TNFRSF25Q93038 417 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 DUSP12Q9UNI6 340 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 TMEM94Q12767 1356 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 NCF4Q15080 339 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 ECM1Q16610 540 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 C16orf62Q7Z3J2 963 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 FAM228AQ86W67 206 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 RTL3Q8N8U3 475 aaKnown RBP12.88□□□□□ -0.35
GPC4-201ENST00000370828 FAM156AQ8NDB6 213 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 FICDQ9BVA6 458 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 J3QRK9 145 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 TOR1BO14657 336 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 PPP4CP60510 307 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 COPZ1P61923 177 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 PTPN11Q06124 597 aaPredicted RBP12.88□□□□□ -0.35
GPC4-201ENST00000370828 ARHGAP36Q6ZRI8 547 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 TTC30AQ86WT1 665 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 SLC22A9Q8IVM8 553 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 OFCC1Q8IZS5 231 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 HELQQ8TDG4 1101 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 AFG1LQ8WV93 481 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 FAR1Q8WVX9 515 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 FBXL8Q96CD0 374 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 DHRS1Q96LJ7 313 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 ZNF560Q96MR9 790 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 C7orf26Q96N11 449 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 LENG8Q96PV6 779 aaPredicted RBP12.88□□□□□ -0.35
GPC4-201ENST00000370828 C17orf75Q9HAS0 396 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 ZNF304Q9HCX3 659 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 KRT84Q9NSB2 600 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 DDIT4Q9NX09 232 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 H2AFY2Q9P0M6 372 aaPredicted RBP12.88□□□□□ -0.35
GPC4-201ENST00000370828 VPS4AQ9UN37 437 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 hCG_1818297A0A087WSY0 165 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 A0A1W2PQ72 361 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 BOLA2-SMG1P6H3BVE0 249 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 ZNF197O14709 1029 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 ATP13A5Q4VNC0 1218 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 CMC1Q7Z7K0 106 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 ZNF540Q8NDQ6 660 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 CDH19Q9H159 772 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 BAIAP2Q9UQB8 552 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 A0A1B0GVG6 124 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 RPS6KA4O75676 772 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 NTSR2O95665 410 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 PGS1Q32NB8 556 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 SPANXN3Q5MJ09 141 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 SLFN11Q7Z7L1 901 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 SNX31Q8N9S9 440 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 APPL2Q8NEU8 664 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 SLC44A1Q8WWI5 657 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 SHC3Q92529 594 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 SPATA33Q96N06 139 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 ZNF221Q9UK13 617 aa12.88□□□□□ -0.35
GPC4-201ENST00000370828 MAGEB16A2A368 324 aa12.87□□□□□ -0.35
GPC4-201ENST00000370828 CLDN25C9JDP6 229 aa12.87□□□□□ -0.35
GPC4-201ENST00000370828 HIST1H2AGP0C0S8 130 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms