RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 LIMD1Q9UGP4 676 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 GPN3Q9UHW5 284 aaPredicted RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 NDRG2Q9UN36 371 aaKnown RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 PCDHB9Q9Y5E1 797 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 LYVE1Q9Y5Y7 322 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 CNTFP26441 200 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 FASTKQ14296 549 aaKnown RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 C16orf72Q14CZ0 275 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 R3HCC1LQ7Z5L2 792 aaKnown RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 DEFB107AQ8IZN7 70 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 RNASE11Q8TAA1 199 aaKnown RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 ING5Q8WYH8 240 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 MLPHQ9BV36 600 aaPredicted RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 HDHD2Q9H0R4 259 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 BRD9Q9H8M2 597 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 RRN3Q9NYV6 651 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 BTBD7Q9P203 1132 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 SLC9A3R1O14745 358 aaPredicted RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 MAPTP10636 758 aaKnown RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 NOGQ13253 232 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 MIIPQ5JXC2 388 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 RERGQ96A58 199 aaPredicted RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 C2orf49Q9BVC5 232 aaPredicted RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 ISM1B1AKI9 464 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 C1QTNF3-AMACRE9PGA6 284 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 HS6ST1O60243 411 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 DEFA1P59665 94 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 DEFA3P59666 94 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 BIKQ13323 160 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 TRIM25Q14258 630 aaKnown RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 CASP12Q6UXS9 341 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 CYP2R1Q6VVX0 501 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 KCNK18Q7Z418 384 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 GLIS3Q8NEA6 775 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 UROC1Q96N76 676 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 REXO4Q9GZR2 422 aaKnown RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 LACRTQ9GZZ8 138 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 SLC28A3Q9HAS3 691 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 NAALADL1Q9UQQ1 740 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 C1orf232A0A0U1RR37 186 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 SLC15A5A6NIM6 579 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 ZNF839A8K0R7 811 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 TPP1O14773 563 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 PEX1O43933 1283 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 TBC1D12O60347 775 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 ATG7O95352 703 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 NTRK1P04629 796 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 LBPP18428 481 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 CRABP2P29373 138 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 RPA3P35244 121 aaPredicted RBP8.67□□□□□ -1.02
ABCA4-201ENST00000370225 BRCC3P46736 316 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 GPAT3Q53EU6 434 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 PSRC1Q6PGN9 363 aaPredicted RBP8.67□□□□□ -1.02
ABCA4-201ENST00000370225 ZPBP2Q6X784 338 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 FAM20CQ8IXL6 584 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 ASZ1Q8WWH4 475 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 KAT5Q92993 513 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 LENG9Q96B70 501 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 NAT9Q9BTE0 207 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 PCDH9Q9HC56 1237 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 EVA1BQ9NVM1 165 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.67□□□□□ -1.02
ABCA4-201ENST00000370225 CASP5P51878 434 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 MCL1Q07820 350 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 ZNF655Q8N720 491 aaPredicted RBP8.67□□□□□ -1.02
ABCA4-201ENST00000370225 MAGEC3Q8TD91 643 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 SH3GL1Q99961 368 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 FAM126AQ9BYI3 521 aaPredicted RBP8.67□□□□□ -1.02
ABCA4-201ENST00000370225 PCDH12Q9NPG4 1184 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 DLGAP2Q9P1A6 1054 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 TRHDEQ9UKU6 1024 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 FRMPD4Q14CM0 1322 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 A0A087X0B3 334 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 TRIM43BA6NCK2 446 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 TRUB2O95900 331 aaKnown RBP8.67□□□□□ -1.02
ABCA4-201ENST00000370225 ZCCHC18P0CG32 403 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 PABPC1P11940 636 aaKnown RBP8.67□□□□□ -1.02
ABCA4-201ENST00000370225 PSMC3P17980 439 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 RPL21P46778 160 aaKnown RBP8.67□□□□□ -1.02
ABCA4-201ENST00000370225 TMEM119Q4V9L6 283 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 ZC3H7AQ8IWR0 971 aaKnown RBP8.67□□□□□ -1.02
ABCA4-201ENST00000370225 FAM9CQ8IZT9 166 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 ACTRT1Q8TDG2 376 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 IDI2Q9BXS1 227 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 RIBC2Q9H4K1 309 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 ATP13A3Q9H7F0 1226 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 TCF7L2Q9NQB0 619 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 AVENQ9NQS1 362 aaPredicted RBP8.67□□□□□ -1.02
ABCA4-201ENST00000370225 ENO4A6NNW6 628 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 RGS14O43566 566 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 PAEPP09466 180 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 OR1D2P34982 312 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 DUSP4Q13115 394 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 NTRK3Q16288 839 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 WDR59Q6PJI9 974 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 ISLR2Q6UXK2 745 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 LRRC74BQ6ZQY2 392 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 TMEM132CQ8N3T6 1108 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 SEMA4AQ9H3S1 761 aa8.67□□□□□ -1.02
ABCA4-201ENST00000370225 GOLGA2P5Q9HBQ8 144 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms