RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 TBL1XO60907 577 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 APRTP07741 180 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 ACVRL1P37023 503 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 ARL4CP56559 192 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 CBLBQ13191 982 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 ZNF177Q13360 481 aaPredicted RBP24.4■■□□□ 1.5
SNX3-203ENST00000368979 HIF1AQ16665 826 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 TCEAL5Q5H9L2 206 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 SYCP2LQ5T4T6 812 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 CFAP58Q5T655 872 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 ALS2CLQ60I27 953 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 CXorf57Q6NSI4 855 aaKnown RBP24.4■■□□□ 1.5
SNX3-203ENST00000368979 PPP1R21Q6ZMI0 780 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 CENPUQ71F23 418 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 TRMT10CQ7L0Y3 403 aaKnown RBP24.4■■□□□ 1.5
SNX3-203ENST00000368979 EFHBQ8N7U6 833 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 MCUQ8NE86 351 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 TTC16Q8NEE8 873 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 TMA16Q96EY4 203 aaKnown RBP24.4■■□□□ 1.5
SNX3-203ENST00000368979 AGAP3Q96P47 875 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 FRMD8Q9BZ67 464 aaPredicted RBP24.4■■□□□ 1.5
SNX3-203ENST00000368979 SP110Q9HB58 689 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 NUP210Q8TEM1 1887 aaPredicted RBP24.4■■□□□ 1.5
SNX3-203ENST00000368979 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.39■■□□□ 1.49
SNX3-203ENST00000368979 TYW5A2RUC4 315 aaKnown RBP24.39■■□□□ 1.49
SNX3-203ENST00000368979 E7ESA3 106 aa24.39■■□□□ 1.49
SNX3-203ENST00000368979 J3KR12 359 aa24.39■■□□□ 1.49
SNX3-203ENST00000368979 EIF3HO15372 352 aaKnown RBP eCLIP24.39■■□□□ 1.49
SNX3-203ENST00000368979 CACNG3O60359 315 aa24.39■■□□□ 1.49
SNX3-203ENST00000368979 RHOCP08134 193 aa24.39■■□□□ 1.49
SNX3-203ENST00000368979 IL10RBQ08334 325 aa24.39■■□□□ 1.49
SNX3-203ENST00000368979 HNRNPDQ14103 355 aaKnown RBP24.39■■□□□ 1.49
SNX3-203ENST00000368979 ZNF77Q15935 545 aa24.39■■□□□ 1.49
SNX3-203ENST00000368979 RARS2Q5T160 578 aaKnown RBP24.39■■□□□ 1.49
SNX3-203ENST00000368979 TDRD5Q8NAT2 981 aaKnown RBP24.39■■□□□ 1.49
SNX3-203ENST00000368979 USP33Q8TEY7 942 aa24.39■■□□□ 1.49
SNX3-203ENST00000368979 ZIM3Q96PE6 472 aa24.39■■□□□ 1.49
SNX3-203ENST00000368979 ACBD3Q9H3P7 528 aa24.39■■□□□ 1.49
SNX3-203ENST00000368979 ZNF576Q9H609 170 aa24.39■■□□□ 1.49
SNX3-203ENST00000368979 RSPH14Q9UHP6 348 aa24.39■■□□□ 1.49
SNX3-203ENST00000368979 TRANK1O15050 2925 aa24.38■■□□□ 1.49
SNX3-203ENST00000368979 A0A0D9SEW6 157 aa24.38■■□□□ 1.49
SNX3-203ENST00000368979 E7EVH7 732 aa24.38■■□□□ 1.49
SNX3-203ENST00000368979 RIPK2O43353 540 aa24.38■■□□□ 1.49
SNX3-203ENST00000368979 LUC7L3O95232 432 aaKnown RBP24.38■■□□□ 1.49
SNX3-203ENST00000368979 NFKB1P19838 968 aa24.38■■□□□ 1.49
SNX3-203ENST00000368979 HOXD9P28356 352 aaPredicted RBP24.38■■□□□ 1.49
SNX3-203ENST00000368979 WEE1P30291 646 aa24.38■■□□□ 1.49
SNX3-203ENST00000368979 TNK2Q07912 1038 aa24.38■■□□□ 1.49
SNX3-203ENST00000368979 FNBP1LQ5T0N5 605 aa24.38■■□□□ 1.49
SNX3-203ENST00000368979 UBAP2Q5T6F2 1119 aaKnown RBP24.38■■□□□ 1.49
SNX3-203ENST00000368979 SERPINB12Q96P63 405 aa24.38■■□□□ 1.49
SNX3-203ENST00000368979 PDFQ9HBH1 243 aa24.38■■□□□ 1.49
SNX3-203ENST00000368979 SAYSD1Q9NPB0 183 aa24.38■■□□□ 1.49
SNX3-203ENST00000368979 GOLGA6BA6NDN3 693 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 F5H423 210 aaPredicted RBP24.37■■□□□ 1.49
SNX3-203ENST00000368979 LINC01565O15544 149 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 PRAMEF11O60813 436 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 MAGEA4P43358 317 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 CDK16Q00536 496 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 MPPE1Q53F39 396 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 MPP7Q5T2T1 576 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 RNF43Q68DV7 783 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 ZNF783Q6ZMS7 281 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 ZNF534Q76KX8 674 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 GPR149Q86SP6 731 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 ZNF354CQ86Y25 554 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 ARID3BQ8IVW6 561 aaPredicted RBP24.37■■□□□ 1.49
SNX3-203ENST00000368979 KLHDC8BQ8IXV7 354 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 PDIK1LQ8N165 341 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 TEX26Q8N6G2 289 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 OR7D4Q8NG98 312 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 FAM53CQ9NYF3 392 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 NINJ2Q9NZG7 142 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 PLAAQ9Y263 795 aa24.37■■□□□ 1.49
SNX3-203ENST00000368979 AGPSO00116 658 aa24.36■■□□□ 1.49
SNX3-203ENST00000368979 ALOX15BO15296 676 aa24.36■■□□□ 1.49
SNX3-203ENST00000368979 HLA-DQB2P05538 268 aa24.36■■□□□ 1.49
SNX3-203ENST00000368979 RENBPP51606 427 aa24.36■■□□□ 1.49
SNX3-203ENST00000368979 PDIA2Q13087 525 aaKnown RBP24.36■■□□□ 1.49
SNX3-203ENST00000368979 CBX2Q14781 532 aaPredicted RBP24.36■■□□□ 1.49
SNX3-203ENST00000368979 MSS51Q4VC12 460 aa24.36■■□□□ 1.49
SNX3-203ENST00000368979 ANKRD54Q6NXT1 300 aa24.36■■□□□ 1.49
SNX3-203ENST00000368979 CAND1Q86VP6 1230 aaKnown RBP24.36■■□□□ 1.49
SNX3-203ENST00000368979 CARNMT1Q8N4J0 409 aa24.36■■□□□ 1.49
SNX3-203ENST00000368979 PDCD7Q8N8D1 485 aaKnown RBP24.36■■□□□ 1.49
SNX3-203ENST00000368979 ACE2Q9BYF1 805 aaPredicted RBP24.36■■□□□ 1.49
SNX3-203ENST00000368979 RBM22Q9NW64 420 aaKnown RBP eCLIP24.36■■□□□ 1.49
SNX3-203ENST00000368979 NFS1Q9Y697 457 aa24.36■■□□□ 1.49
SNX3-203ENST00000368979 TTC4O95801 387 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 NUDT17P0C025 328 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 MAGEA3P43357 314 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 IFNAR2P48551 515 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 FASTKD3Q14CZ7 662 aaKnown RBP24.35■■□□□ 1.49
SNX3-203ENST00000368979 SYCE2Q6PIF2 218 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 LRIG3Q6UXM1 1119 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 ZNF599Q96NL3 588 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 FCRL5Q96RD9 977 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 MLPHQ9BV36 600 aaPredicted RBP24.35■■□□□ 1.49
SNX3-203ENST00000368979 KIF9Q9HAQ2 790 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms