RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ADPRHL2Q9NX46 363 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.44■□□□□ 0.54
SNX27-202ENST00000368841 ANKDD1BA6NHY2 528 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 GJB1P08034 283 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 ACVR2BQ13705 512 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 KPNB1Q14974 876 aaKnown RBP18.44■□□□□ 0.54
SNX27-202ENST00000368841 CCNG2Q16589 344 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 WSCD1Q658N2 575 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 KCNT2Q6UVM3 1135 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 ACTRT1Q8TDG2 376 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 PDP2Q9P2J9 529 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 OPTCQ9UBM4 332 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 EFCAB10A6NFE3 127 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 GPR1P46091 355 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 C19orf60Q96EN9 201 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 PAIP1Q9H074 479 aaKnown RBP18.44■□□□□ 0.54
SNX27-202ENST00000368841 LRRC4BQ9NT99 713 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 VIL1P09327 827 aaKnown RBP18.44■□□□□ 0.54
SNX27-202ENST00000368841 ZNF605Q86T29 641 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 OGDHLQ9ULD0 1010 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 KIAA1257Q9ULG3 409 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 GSAPA4D1B5 854 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 SCAMP1O15126 338 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 FAM58BPP0C7Q3 252 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 MAPKAPK2P49137 400 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 MAXP61244 160 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 MCOLN3Q8TDD5 553 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 FERD3LQ96RJ6 166 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 POLNQ7Z5Q5 900 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 MOSPD2Q8NHP6 518 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 TMX2Q9Y320 296 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 MIPP30301 263 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 NUP107P57740 925 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 MADCAM1Q13477 382 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 ZC3H12AQ5D1E8 599 aaKnown RBP18.43■□□□□ 0.54
SNX27-202ENST00000368841 F8VP50 259 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 H0Y858 1186 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 RGS14O43566 566 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 BCL10O95999 233 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 RARAP10276 462 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 ITGA3P26006 1051 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 CNTFP26441 200 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 ZNF697Q5TEC3 545 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 SLC27A1Q6PCB7 646 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 TAS2R14Q9NYV8 317 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 STK39Q9UEW8 545 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 A0A0B4J269 797 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 EPN2O95208 641 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 PGK1P00558 417 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 LRPAP1P30533 357 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 CACNA2D1P54289 1103 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 MRPS22P82650 360 aaKnown RBP18.43■□□□□ 0.54
SNX27-202ENST00000368841 CCDC153Q494R4 210 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 AHI1Q8N157 1196 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 PDCD2LQ9BRP1 358 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 PRRG3Q9BZD7 231 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 BATF3Q9NR55 127 aa18.43■□□□□ 0.54
SNX27-202ENST00000368841 HELQQ8TDG4 1101 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 SUSD6Q92537 303 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 RXFP1Q9HBX9 757 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 FCHO1O14526 889 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 RECQL4O94761 1208 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 KCNH1O95259 989 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 CLUP10909 449 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 CXCL9Q07325 125 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 FAM183BPQ6ZVS7 135 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 CCNJLQ8IV13 435 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 ENGASEQ8NFI3 743 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 FRMD8Q9BZ67 464 aaPredicted RBP18.42■□□□□ 0.54
SNX27-202ENST00000368841 NMRAL1Q9HBL8 299 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 CDC42BPAQ5VT25 1732 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 NT5C1B-RDH14C9J2C7 533 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 PTPN4P29074 926 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 THOP1P52888 689 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 ZNF544Q6NX49 715 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 DSELQ8IZU8 1212 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 LEMD2Q8NC56 503 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 ENKURQ8TC29 256 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 MTMR8Q96EF0 704 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 HIC2Q96JB3 615 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 CDK5RAP1Q96SZ6 601 aaKnown RBP18.42■□□□□ 0.54
SNX27-202ENST00000368841 PLAGL2Q9UPG8 496 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 IQGAP3Q86VI3 1631 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 DYTNA2CJ06 578 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 CDC73Q6P1J9 531 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 C4orf19Q8IY42 314 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 CCDC185Q8N715 623 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 SCAIQ8N9R8 606 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 EFR3BQ9Y2G0 817 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 TMEM191CA6NGB0 347 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 LSM8O95777 96 aaKnown RBP18.42■□□□□ 0.54
SNX27-202ENST00000368841 USP45Q70EL2 814 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 DENND6AQ8IWF6 608 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 ZNF276Q8N554 614 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 IL17RBQ9NRM6 502 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 MRPS7Q9Y2R9 242 aaKnown RBP18.42■□□□□ 0.54
SNX27-202ENST00000368841 C1orf167Q5SNV9 1468 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 OR10H2O60403 315 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 SLITRK3O94933 977 aa18.42■□□□□ 0.54
SNX27-202ENST00000368841 IL2P60568 153 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms