RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 CDC42EP1Q00587 391 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 PPARDQ03181 441 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 ICA1Q05084 483 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 SGCGQ13326 291 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 DLGAP5Q15398 846 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 CLPPQ16740 277 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 MAJINQ3KP22 176 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 ARL13BQ3SXY8 428 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 DCAF17Q5H9S7 520 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 THEMIS2Q5TEJ8 643 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 KRT40Q6A162 431 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 RPUSD3Q6P087 351 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 MAEAQ7L5Y9 396 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 CCDC13Q8IYE1 715 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 KRT78Q8N1N4 520 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 CCDC33Q8N5R6 958 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 OR2C3Q8N628 320 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 PCSK9Q8NBP7 692 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 MOSPD2Q8NHP6 518 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 ASB12Q8WXK4 309 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 TMEM176AQ96HP8 235 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 PARK7Q99497 189 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 PDCD2LQ9BRP1 358 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 ZPBPQ9BS86 351 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 DDX23Q9BUQ8 820 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 TMEM39BQ9GZU3 492 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 NT5C3AQ9H0P0 336 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 STMN4Q9H169 189 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 TNMDQ9H2S6 317 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 GHITMQ9H3K2 345 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 ARMT1Q9H993 441 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 IL23AQ9NPF7 189 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 TLR9Q9NR96 1032 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 TDP1Q9NUW8 608 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 TBC1D14Q9P2M4 693 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 STK39Q9UEW8 545 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 TBC1D29Q9UFV1 150 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 TRPS1Q9UHF7 1281 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 PTBP2Q9UKA9 531 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 PCDHA3Q9Y5H8 950 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 AP1M2Q9Y6Q5 423 aa5.34□□□□□ -1.55
ECHDC1-204ENST00000368292 GVINP1Q7Z2Y8 2422 aa5.34□□□□□ -1.56
ECHDC1-204ENST00000368292 FLT1P17948 1338 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 TISP43B9A030 160 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 B9A039 149 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 ADCY6O43306 1168 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 RIPK2O43353 540 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 THAP12O43422 761 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 URI1O94763 535 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 ADCY5O95622 1261 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 RPLP2P05387 115 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 S100A6P06703 90 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 CLTBP09497 229 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 CYP2A6P11509 494 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 SCG2P13521 617 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 ACO1P21399 889 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 KLRK1P26718 216 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 CA8P35219 290 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 MSH2P43246 934 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 POLD2P49005 469 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 ARFIP1P53367 373 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 CACNB3P54284 484 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 ARL4CP56559 192 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 SLC26A5P58743 744 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 RAB1AP62820 205 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 CUL4AQ13619 759 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 KRT32Q14532 448 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 NAA25Q14CX7 972 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 POSTNQ15063 836 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 KHDC1Q4VXA5 237 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 METTL11BQ5VVY1 283 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 WDR73Q6P4I2 378 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 APOA5Q6Q788 366 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 RFX8Q6ZV50 586 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 IKBIPQ70UQ0 350 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 DPP9Q86TI2 863 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 CMTM4Q8IZR5 234 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 SLC7A5P1Q8MH63 180 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 ZNF808Q8N4W9 903 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 ZGPATQ8N5A5 531 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 ZBTB44Q8NCP5 570 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 BBOF1Q8ND07 529 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 C3orf20Q8ND61 904 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 OR6C4Q8NGE1 309 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 GOLGA5Q8TBA6 731 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 IFI44Q8TCB0 444 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 ZNF480Q8WV37 535 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 TRAPPC12Q8WVT3 735 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 LRTOMTQ8WZ04 291 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 HERVK_113Q902F9 699 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 SGCDQ92629 289 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 EDAQ92838 391 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 RUNDC3BQ96NL0 473 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 YME1L1Q96TA2 773 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 VRK1Q99986 396 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 THUMPD2Q9BTF0 503 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 ACAT2Q9BWD1 397 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 LDAHQ9H6V9 325 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 ACAD9Q9H845 621 aa5.33□□□□□ -1.56
ECHDC1-204ENST00000368292 MANSC1Q9H8J5 431 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms