RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 GLRA2P23416 452 aa12.23□□□□□ -0.45
CDC42BPA-203ENST00000366766 DDR1Q08345 913 aa12.23□□□□□ -0.45
CDC42BPA-203ENST00000366766 ADAMTSL2Q86TH1 951 aa12.23□□□□□ -0.45
CDC42BPA-203ENST00000366766 GLMNQ92990 594 aa12.23□□□□□ -0.45
CDC42BPA-203ENST00000366766 KLHL3Q9UH77 587 aa12.23□□□□□ -0.45
CDC42BPA-203ENST00000366766 RGSL1A5PLK6 1076 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 IFRD1O00458 451 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 COL6A2P12110 1019 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 DGKAP23743 735 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 MATKP42679 507 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 LIPMQ5VYY2 423 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 FNDC5Q8NAU1 212 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 OTULINQ96BN8 352 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 RSL24D1Q9UHA3 163 aaKnown RBP12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 HDAC3O15379 428 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 MBL2P11226 248 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 ZSWIM2Q8NEG5 633 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 HELQQ8TDG4 1101 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 OSMRQ99650 979 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 ATAD3AQ9NVI7 634 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 SLC12A8A0AV02 714 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 PSMD12O00232 456 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 MRASO14807 208 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 TPSB2P20231 275 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 EPHX2P34913 555 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 GABRB2P47870 512 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 TRAF2Q12933 501 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 TPSAB1Q15661 275 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 TTC23Q5W5X9 447 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.22□□□□□ -0.453e-6■■■■■ 34.1
CDC42BPA-203ENST00000366766 SH3GL2Q99962 352 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 BBS2Q9BXC9 721 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 OXCT2Q9BYC2 517 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 COPS7BQ9H9Q2 264 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 BBIP1A8MTZ0 92 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 DNAJA2O60884 412 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 RAG1P15918 1043 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 OR12D3Q9UGF7 316 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 ZMYND8Q9ULU4 1186 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 PLA2G4CQ9UP65 541 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 RAP2CQ9Y3L5 183 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 RBM47A0AV96 593 aaKnown RBP12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 INHBEP58166 350 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 DCTN2Q13561 401 aaKnown RBP12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 ATG16L2Q8NAA4 619 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 MID1IP1Q9NPA3 183 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 PLSCR1O15162 318 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 DCXO43602 365 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 RECQL4O94761 1208 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 LBPP18428 481 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 ADSLP30566 484 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 RPA3P35244 121 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 ACVR2BQ13705 512 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 BRMS1LQ5PSV4 323 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 TMEM26Q6ZUK4 368 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 KCNK18Q7Z418 384 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 NKD2Q969F2 451 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 OSBPL11Q9BXB4 747 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 A0A088AWK7 358 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 CLOCKO15516 846 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 ALDH2P05091 517 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 ZNF10P21506 573 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 DRD4P21917 467 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 LRPAP1P30533 357 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 FAAP100Q0VG06 881 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 ACO2Q99798 780 aaKnown RBP12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 CHST7Q9NS84 486 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 PCDHB12Q9Y5F1 795 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 NR1H2P55055 460 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 VAC14Q08AM6 782 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 C2CD6Q53TS8 623 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 GPSM1Q86YR5 675 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 TRPV2Q9Y5S1 764 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 CNTNAP2Q9UHC6 1331 aa12.22□□□□□ -0.45
CDC42BPA-203ENST00000366766 SERPINI2O75830 405 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 YBX3P16989 372 aaKnown RBP eCLIP12.21□□□□□ -0.451e-6■■□□□ 12.3
CDC42BPA-203ENST00000366766 PTPN3P26045 913 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 METTL21CQ5VZV1 264 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 TLK2Q86UE8 772 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 TRABD2AQ86V40 505 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 DHRSXQ8N5I4 330 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 C4orf32Q8N8J7 132 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 INPP4BO15327 924 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 MFSD10Q14728 455 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 CCDC142Q17RM4 750 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 TMEM139Q8IV31 216 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 GNPTGQ9UJJ9 305 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 SERPIND1P05546 499 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 ZCCHC18P0CG32 403 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 SCNN1BP51168 640 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 PRKCQQ04759 706 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 SLC9A3R1O14745 358 aaPredicted RBP12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 FGF1P05230 155 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 ATP6V1C1P21283 382 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 YY1P25490 414 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 CASP5P51878 434 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 KIAA0408Q6ZU52 694 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 GLT6D1Q7Z4J2 308 aa12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 MRPS26Q9BYN8 205 aaKnown RBP12.21□□□□□ -0.45
CDC42BPA-203ENST00000366766 TSR3Q9UJK0 312 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms