RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 A0A1B0GVC2 190 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 FOXO6A8MYZ6 492 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 F8W810 466 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 KIR2DS3K7RE56 304 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 HLA-DQA2P01906 255 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 PRKCHP24723 683 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 CHRNA5P30532 468 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 PGM1P36871 562 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 STAT1P42224 750 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 CYP2J2P51589 502 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 PMPCAQ10713 525 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 KLF9Q13886 244 aaPredicted RBP4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 SMTNL2Q2TAL5 461 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 ENTPD8Q5MY95 495 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 VWA5B1Q5TIE3 1220 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 HMBOX1Q6NT76 420 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 AADACL2Q6P093 401 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 DEF8Q6ZN54 512 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 CCDC25Q86WR0 208 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 ZNF575Q86XF7 245 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 LSM14AQ8ND56 463 aaKnown RBP4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 RUFY2Q8WXA3 655 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 NCSTNQ92542 709 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 TUBB6Q9BUF5 446 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 LMAN2LQ9H0V9 348 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 HIPK3Q9H422 1215 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 SPAG4Q9NPE6 437 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 THSD1Q9NS62 852 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 TRNAU1APQ9NX07 287 aaKnown RBP4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 NLKQ9UBE8 527 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 PGAP2Q9UHJ9 254 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 AGO2Q9UKV8 859 aaKnown RBP4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 ZNF804BA4D1E1 1349 aa4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 TTBK1Q5TCY1 1321 aaPredicted RBP4.65□□□□□ -1.67
RNU6-560P-201ENST00000364007 A0A0G2JK05 382 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 DNAJC9-AS1A6NH13 148 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 ZNF814B7Z6K7 855 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 CNOT3O75175 753 aaKnown RBP4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 CBX6O95503 412 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 GJC1P36383 396 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 LIFRP42702 1097 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 GOLGA8FQ08AF8 430 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 MTX1Q13505 466 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 NFIL3Q16649 462 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 C5orf22Q49AR2 442 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 C10orf25Q5T742 122 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 MORN5Q5VZ52 161 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 TTLL5Q6EMB2 1281 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 RETSATQ6NUM9 610 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 GJB7Q6PEY0 223 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 ANKRD13BQ86YJ7 626 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 DDIASQ8IXT1 998 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 CMASQ8NFW8 434 aaPredicted RBP4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 COQ8BQ96D53 544 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 MSI2Q96DH6 328 aaKnown RBP4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 ZBTB10Q96DT7 871 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 ZNF419Q96HQ0 510 aaPredicted RBP4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 TTYH1Q9H313 450 aaPredicted RBP4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 TTC12Q9H892 705 aaPredicted RBP4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 MSRB1Q9NZV6 116 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 HEY2Q9UBP5 337 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 PLEKHB1Q9UF11 243 aaPredicted RBP4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 COG5Q9UP83 839 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 ZMYM2Q9UBW7 1377 aa4.64□□□□□ -1.67
RNU6-560P-201ENST00000364007 CACNA1IQ9P0X4 2223 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 TRBV5-7A0A0A0MS05 114 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 OR6C68A6NDL8 312 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 A6NLC8 198 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 A6NNC1 897 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 PRPF4O43172 522 aaKnown RBP eCLIP4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 STRNO43815 780 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 DDAH2O95865 285 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 TOP3BO95985 862 aaKnown RBP4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 CHRNB1P11230 501 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 PRF1P14222 555 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 XBP1P17861 261 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 MMP13P45452 471 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 GALNT2Q10471 571 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 TBL3Q12788 808 aaKnown RBP4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 G3BP1Q13283 466 aaKnown RBP eCLIP4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 NAA25Q14CX7 972 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 RABEP1Q15276 862 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 RBMS2Q15434 407 aaKnown RBP4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 ETFDHQ16134 617 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 SLC18A3Q16572 532 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 PIK3CD-AS1Q5SR53 167 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 TTC39AQ5SRH9 613 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 ASPHD1Q5U4P2 390 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 ISM2Q6H9L7 571 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 AAGABQ6PD74 315 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 SHC4Q6S5L8 630 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 PIP4P1Q86T03 277 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 GPSM1Q86YR5 675 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 C16orf52Q8NHV5 167 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 ELP4Q96EB1 424 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 RRP36Q96EU6 259 aaKnown RBP4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 NPLQ9BXD5 320 aaPredicted RBP4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 SLC32A1Q9H598 525 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms