RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 ZNF12P17014 697 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 ME2P23368 584 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 THOP1P52888 689 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 CDH6P55285 790 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 CDKL1Q00532 357 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 PURAQ00577 322 aaKnown RBP19.42■□□□□ 0.7
CMTM3-201ENST00000361909 NIPAL4Q0D2K0 466 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 SURF1Q15526 300 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 TRMT10BQ6PF06 316 aaKnown RBP19.42■□□□□ 0.7
CMTM3-201ENST00000361909 CARM1Q86X55 608 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 BRSK2Q8IWQ3 736 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 DSELQ8IZU8 1212 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 TMEM102Q8N9M5 508 aaPredicted RBP19.42■□□□□ 0.7
CMTM3-201ENST00000361909 RNF157Q96PX1 679 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 CDH7Q9ULB5 785 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 ZNF232Q9UNY5 417 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 H3BNH8 94 aa19.41■□□□□ 0.7
CMTM3-201ENST00000361909 TPP1O14773 563 aa19.41■□□□□ 0.7
CMTM3-201ENST00000361909 SUPT3HO75486 399 aa19.41■□□□□ 0.7
CMTM3-201ENST00000361909 ALDOAP04075 364 aaKnown RBP19.41■□□□□ 0.7
CMTM3-201ENST00000361909 IQCF3P0C7M6 154 aa19.41■□□□□ 0.7
CMTM3-201ENST00000361909 MLNP12872 115 aa19.41■□□□□ 0.7
CMTM3-201ENST00000361909 PPARGP37231 505 aaPredicted RBP19.41■□□□□ 0.7
CMTM3-201ENST00000361909 PCBP1Q15365 356 aaKnown RBP eCLIP19.41■□□□□ 0.7
CMTM3-201ENST00000361909 XYLT1Q86Y38 959 aa19.41■□□□□ 0.7
CMTM3-201ENST00000361909 LILRA2Q8N149 483 aa19.41■□□□□ 0.7
CMTM3-201ENST00000361909 CPSF7Q8N684 471 aaKnown RBP19.41■□□□□ 0.7
CMTM3-201ENST00000361909 TERB1Q8NA31 727 aa19.41■□□□□ 0.7
CMTM3-201ENST00000361909 OR5B17Q8NGF7 314 aa19.41■□□□□ 0.7
CMTM3-201ENST00000361909 PKP2Q99959 881 aa19.41■□□□□ 0.7
CMTM3-201ENST00000361909 COG4Q9H9E3 785 aa19.41■□□□□ 0.7
CMTM3-201ENST00000361909 SPC25Q9HBM1 224 aa19.41■□□□□ 0.7
CMTM3-201ENST00000361909 TCF7L2Q9NQB0 619 aa19.41■□□□□ 0.7
CMTM3-201ENST00000361909 RNF186Q9NXI6 227 aa19.41■□□□□ 0.7
CMTM3-201ENST00000361909 PCSK1NQ9UHG2 260 aa19.41■□□□□ 0.7
CMTM3-201ENST00000361909 ARHGEF37A1IGU5 675 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 ZNF487B1APH4 448 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 MAGEB3O15480 346 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 TADA2AO75478 443 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 TRPA1O75762 1119 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 GNRH1P01148 92 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 PIK3R1P27986 724 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 HMOX2P30519 316 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 MLH1P40692 756 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 GARSP41250 739 aaKnown RBP19.4■□□□□ 0.7
CMTM3-201ENST00000361909 NRLP54845 237 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 BEX3Q00994 111 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 AMHR2Q16671 573 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 NPNTQ6UXI9 565 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 BHLHE22Q8NFJ8 381 aaPredicted RBP19.4■□□□□ 0.7
CMTM3-201ENST00000361909 BORCS5Q969J3 196 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 COX4I2Q96KJ9 171 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 LENG8Q96PV6 779 aaPredicted RBP19.4■□□□□ 0.7
CMTM3-201ENST00000361909 TMEM165Q9HC07 324 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 PTBP2Q9UKA9 531 aaKnown RBP19.4■□□□□ 0.7
CMTM3-201ENST00000361909 CPSF3Q9UKF6 684 aaKnown RBP19.4■□□□□ 0.7
CMTM3-201ENST00000361909 KPNA7A9QM74 516 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 ZNF26P17031 533 aaPredicted RBP19.4■□□□□ 0.7
CMTM3-201ENST00000361909 XRCC1P18887 633 aaPredicted RBP19.4■□□□□ 0.7
CMTM3-201ENST00000361909 HOXC8P31273 242 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 CD151P48509 253 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 ESRRGP62508 458 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 GK3PQ14409 553 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 ZNF534Q76KX8 674 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 LZTR1Q8N653 840 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 DQX1Q8TE96 717 aaKnown RBP19.4■□□□□ 0.7
CMTM3-201ENST00000361909 RMND5BQ96G75 393 aaPredicted RBP19.4■□□□□ 0.7
CMTM3-201ENST00000361909 PALMDQ9NP74 551 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 XPNPEP3Q9NQH7 507 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.4■□□□□ 0.7
CMTM3-201ENST00000361909 MID2Q9UJV3 735 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 ADAM28Q9UKQ2 775 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 SLC8A2Q9UPR5 921 aa19.4■□□□□ 0.7
CMTM3-201ENST00000361909 GOLGA8QA0A0J9YX86 632 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 GOLGA8OA6NCC3 632 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 TRIM64CA6NLI5 447 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 GOLGA8NF8WBI6 632 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 APOL1O14791 398 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 HSPA4LO95757 839 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 CACNB2Q08289 660 aaPredicted RBP19.39■□□□□ 0.69
CMTM3-201ENST00000361909 KYAT1Q16773 422 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 KCTD21Q4G0X4 260 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 ZBTB41Q5SVQ8 909 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 IRAK1BP1Q5VVH5 260 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 GRAMD4Q6IC98 578 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 DENND1BQ6P3S1 775 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 ZBTB33Q86T24 672 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 EFCAB3Q8N7B9 438 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 ZNF784Q8NCA9 323 aaPredicted RBP19.39■□□□□ 0.69
CMTM3-201ENST00000361909 TFAP2BQ92481 460 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 ISL2Q96A47 359 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 MCRS1Q96EZ8 462 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 ZNF668Q96K58 619 aaPredicted RBP19.39■□□□□ 0.69
CMTM3-201ENST00000361909 RANBP9Q96S59 729 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 CDRT15Q96T59 188 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 NAT9Q9BTE0 207 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 ADAMTS10Q9H324 1103 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 SRRDQ9UH36 339 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 AIM2O14862 343 aa19.39■□□□□ 0.69
CMTM3-201ENST00000361909 B4GALT5O43286 388 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms