RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PLD3Q8IV08 490 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 RIN3Q8TB24 985 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 CSPG4P5Q96PW8 444 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 KLHL25Q9H0H3 589 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 SSU72Q9NP77 194 aaKnown RBP14.13□□□□□ -0.15
COL6A1-201ENST00000361866 C6orf203Q9P0P8 240 aaPredicted RBP14.13□□□□□ -0.15
COL6A1-201ENST00000361866 FAM149AA5PLN7 773 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 SPATA31C2B4DYI2 1134 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 CLDN5O00501 218 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 MAFO75444 373 aaPredicted RBP14.13□□□□□ -0.15
COL6A1-201ENST00000361866 IDH3AP50213 366 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 SLC7A2P52569 658 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 GPR107Q5VW38 600 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 SPATA2LQ8IUW3 424 aaPredicted RBP14.13□□□□□ -0.15
COL6A1-201ENST00000361866 DNERQ8NFT8 737 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 BHMTQ93088 406 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 GATA5Q9BWX5 397 aaPredicted RBP14.13□□□□□ -0.15
COL6A1-201ENST00000361866 ALG9Q9H6U8 611 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 POLR1BQ9H9Y6 1135 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 NDUFAF1Q9Y375 327 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 RAP2CQ9Y3L5 183 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 LINC00854A0A1B0GVQ3 168 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 ADCY6O43306 1168 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 MAN1A2O60476 641 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 ATP5BP06576 529 aaKnown RBP14.13□□□□□ -0.15
COL6A1-201ENST00000361866 CCDC166P0CW27 439 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 GM2AP17900 193 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 PTPRAP18433 802 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 TFEBP19484 476 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 POU4F1Q01851 419 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 PATL1Q86TB9 770 aaKnown RBP14.13□□□□□ -0.15
COL6A1-201ENST00000361866 TMEM192Q8IY95 271 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 TWNKQ96RR1 684 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 SDCBP2Q9H190 292 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 CATSPERBQ9H7T0 1116 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 VTI1BQ9UEU0 232 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 DEAF1O75398 565 aaPredicted RBP14.12□□□□□ -0.15
COL6A1-201ENST00000361866 T-ENOLP0DO92 83 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 GEMP55040 296 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 C21orf59P57076 290 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 CHRNB3Q05901 458 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 SAMD4BQ5PRF9 694 aaKnown RBP14.12□□□□□ -0.15
COL6A1-201ENST00000361866 PHTF2Q8N3S3 785 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 DHRSXQ8N5I4 330 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 SLC4A11Q8NBS3 891 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 RP9Q8TA86 221 aaKnown RBP14.12□□□□□ -0.15
COL6A1-201ENST00000361866 EMID1Q96A84 441 aaPredicted RBP14.12□□□□□ -0.15
COL6A1-201ENST00000361866 ERLEC1Q96DZ1 483 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 AGAP2Q99490 1192 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 MRPL45Q9BRJ2 306 aaKnown RBP14.12□□□□□ -0.15
COL6A1-201ENST00000361866 RNF112Q9ULX5 631 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 SCN11AQ9UI33 1791 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 A0A087WXM4 84 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 STX16-NPEPL1H3BU86 382 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 ENDOD1O94919 500 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 OR6B1O95007 311 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 BCL10O95999 233 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 CHRNGP07510 517 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 TGFB3P10600 412 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 GMPRP36959 345 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 SCNN1BP51168 640 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 NEPROQ6NW34 567 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 KBTBD2Q8IY47 623 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 TKTL2Q9H0I9 626 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 CASS4Q9NQ75 786 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 DDX43Q9NXZ2 648 aaKnown RBP14.12□□□□□ -0.15
COL6A1-201ENST00000361866 ABI2Q9NYB9 513 aaPredicted RBP14.12□□□□□ -0.15
COL6A1-201ENST00000361866 SYNPO2Q9UMS6 1093 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 RBP1P09455 135 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 OCM2P0CE71 109 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 OCMP0CE72 109 aaPredicted RBP14.12□□□□□ -0.15
COL6A1-201ENST00000361866 PCNAP12004 261 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 GSSP48637 474 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 MRPS15P82914 257 aaKnown RBP14.12□□□□□ -0.15
COL6A1-201ENST00000361866 ITGADQ13349 1161 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 DENND1AQ8TEH3 1009 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 ZC3H15Q8WU90 426 aaKnown RBP14.12□□□□□ -0.15
COL6A1-201ENST00000361866 FAR2Q96K12 515 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 LPIN3Q9BQK8 851 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 SLC25A23Q9BV35 468 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 LHX5Q9H2C1 402 aa14.12□□□□□ -0.15
COL6A1-201ENST00000361866 OLA1Q9NTK5 396 aaKnown RBP14.12□□□□□ -0.15
COL6A1-201ENST00000361866 MYOCOSA0A1B0GUC4 107 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 GPR25O00155 361 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 MFSD11O43934 449 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 RECQL4O94761 1208 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 SFT2D3Q587I9 215 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 PITRM1Q5JRX3 1037 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 PPM1LQ5SGD2 360 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 FRMD7Q6ZUT3 714 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 PARP8Q8N3A8 854 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 FNIP1Q8TF40 1166 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 GLMNQ92990 594 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 FBXL18Q96ME1 805 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 MTG1Q9BT17 334 aaPredicted RBP14.11□□□□□ -0.15
COL6A1-201ENST00000361866 DHX33Q9H6R0 707 aaKnown RBP14.11□□□□□ -0.15
COL6A1-201ENST00000361866 OR12D3Q9UGF7 316 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 ATP11BQ9Y2G3 1177 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 KCNU1A8MYU2 1149 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 INPP1P49441 399 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms