RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 ZMPSTE24O75844 475 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 PAPSS2O95340 614 aaPredicted RBP14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 PDGFBP01127 241 aaPredicted RBP14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 TGM2P21980 687 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 NTSR1P30989 418 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 ZNF33AQ06730 810 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 PTPRNQ16849 979 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 INO80DQ53TQ3 878 aaPredicted RBP14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 TMEM31Q5JXX7 168 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 NCBP2-AS2Q69YL0 99 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 SYT13Q7L8C5 426 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 ARHGAP12Q8IWW6 846 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 FATE1Q969F0 183 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 ZNF599Q96NL3 588 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 PSMB7Q99436 277 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 SPON2Q9BUD6 331 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 TMEM245Q9H330 911 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 C11orf16Q9NQ32 467 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 ETNK2Q9NVF9 386 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 SUN2Q9UH99 717 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 VPS51Q9UID3 782 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 MMP17Q9ULZ9 603 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 ERVW-1Q9UQF0 538 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 ZDBF2Q9HCK1 2354 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 USP27XA6NNY8 438 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 CBX4O00257 560 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 ATP9BO43861 1147 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 ZNF189O75820 626 aaPredicted RBP14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 TJP3O95049 919 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 PYGMP11217 842 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 TIE1P35590 1138 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 CCR3P51677 355 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 ZNF234Q14588 700 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 RFTN1Q14699 578 aaPredicted RBP14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 C2orf27AQ580R0 203 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 ZNF569Q5MCW4 686 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 EGFLAMQ63HQ2 1017 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 BBS12Q6ZW61 710 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 RFX6Q8HWS3 928 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 SFTPA1Q8IWL2 248 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 CHPFQ8IZ52 775 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 NPWQ8N729 165 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 PLD5Q8N7P1 536 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 OR7D4Q8NG98 312 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 RPLP0P6Q8NHW5 317 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 HMCESQ96FZ2 354 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 MRGPRX3Q96LB0 322 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 TLR10Q9BXR5 811 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 OSBPL8Q9BZF1 889 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 CEP44Q9C0F1 390 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 SLC39A8Q9C0K1 460 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 FBRSQ9HAH7 460 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 RBM12Q9NTZ6 932 aaKnown RBP14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 HCN2Q9UL51 889 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 PACSIN2Q9UNF0 486 aaPredicted RBP14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 CHD5Q8TDI0 1954 aa14.13□□□□□ -0.15
NSMCE1-201ENST00000361439 MIA3Q5JRA6 1907 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 TARSL2A2RTX5 802 aaKnown RBP14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 DLL1O00548 723 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 PI15O43692 258 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 CST8O60676 142 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 PRAMEF11O60813 436 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 KLF8O95600 359 aaPredicted RBP14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 DCNP07585 359 aaKnown RBP14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 C7P10643 843 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 AVPR2P30518 371 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 ACVRL1P37023 503 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 SERPINH1P50454 418 aaKnown RBP14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 PAPOLAP51003 745 aaKnown RBP14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 DGKEP52429 567 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 SEC13P55735 322 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 IL10RBQ08334 325 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 GALNT2Q10471 571 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 HNRNPA1L2Q32P51 320 aaKnown RBP14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 FNDC3BQ53EP0 1204 aaKnown RBP14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 SEL1L2Q5TEA6 688 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 EMC10Q5UCC4 262 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 SERPINA13PQ6UXR4 307 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 ZNF354CQ86Y25 554 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 PLPP6Q8IY26 295 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 SH2D3CQ8N5H7 860 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 ATPAF2Q8N5M1 289 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 CAMKK1Q8N5S9 505 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 ALLCQ8N6M5 410 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 TXNDC5Q8NBS9 432 aaKnown RBP14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 ISG20Q96AZ6 181 aaKnown RBP14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 MYO19Q96H55 970 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 CELF6Q96J87 481 aaKnown RBP14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 TSGA13Q96PP4 275 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 DTLQ9NZJ0 730 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 IPO11Q9UI26 975 aaKnown RBP14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 ZKSCAN5Q9Y2L8 839 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 STON1Q9Y6Q2 735 aa14.12□□□□□ -0.15
NSMCE1-201ENST00000361439 EDDM13A0A1B0GTR0 161 aa14.11□□□□□ -0.15
NSMCE1-201ENST00000361439 APOC4-APOC2K7ER74 178 aa14.11□□□□□ -0.15
NSMCE1-201ENST00000361439 DFFAO00273 331 aa14.11□□□□□ -0.15
NSMCE1-201ENST00000361439 CES2O00748 559 aa14.11□□□□□ -0.15
NSMCE1-201ENST00000361439 SYNCRIPO60506 623 aaKnown RBP14.11□□□□□ -0.15
NSMCE1-201ENST00000361439 SNAP91O60641 907 aa14.11□□□□□ -0.15
NSMCE1-201ENST00000361439 ADAM23O75077 832 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 230.4 ms