RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 COQ10BQ9H8M1 238 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 CACYBPQ9HB71 228 aaKnown RBP16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 MID1IP1Q9NPA3 183 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 WDR37Q9Y2I8 494 aa16.23■□□□□ 0.19
CLSTN1-201ENST00000361311 GAS2O43903 313 aaKnown RBP16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 CAP2P40123 477 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 ST13P50502 369 aaKnown RBP16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 HK2P52789 917 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 SCARA3Q6AZY7 606 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 ARMCX6Q7L4S7 300 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 SYTL1Q8IYJ3 562 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 SLC35B2Q8TB61 432 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 DENND1AQ8TEH3 1009 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 LRTOMTQ8WZ04 291 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 FIG4Q92562 907 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 VPS33AQ96AX1 596 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 SPON2Q9BUD6 331 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 SMARCAD1Q9H4L7 1026 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 MYH13Q9UKX3 1938 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 FAM95CA0A1B0GW59 222 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 TYW5A2RUC4 315 aaKnown RBP16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 EVPLLA8MZ36 301 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 ASS1P00966 412 aaKnown RBP16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 T-ENOLP0DO92 83 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 RAB15P59190 212 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 SGO1Q5FBB7 561 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 ZNF781Q8N8C0 355 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 POC5Q8NA72 575 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 SLC10A4Q96EP9 437 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 CAB39LQ9H9S4 337 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 ACSS2Q9NR19 701 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 TPRKBQ9Y3C4 175 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 ATP6AP2A0A1C7CYW4 349 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 TRIM24O15164 1050 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 ATP6AP2O75787 350 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 AOC1P19801 751 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 ARMC4Q5T2S8 1044 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 UTS2BQ765I0 119 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 BPIFB6Q8NFQ5 453 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 WDCPQ9H6R7 721 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 XPR1Q9UBH6 696 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 MORF4L1Q9UBU8 362 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 RNF112Q9ULX5 631 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 GMEB1Q9Y692 573 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 NCAM2O15394 837 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 ALOX5P09917 674 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 TXNP10599 105 aaKnown RBP16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 ATP5F1P24539 256 aaPredicted RBP16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 RPL26P61254 145 aaKnown RBP16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 PLCL1Q15111 1095 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 C11orf91Q3C1V1 193 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 TRMT10BQ6PF06 316 aaKnown RBP16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 PSMA8Q8TAA3 256 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 ITFG1Q8TB96 612 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 S100ZQ8WXG8 99 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 TRIM63Q969Q1 353 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 IMPAD1Q9NX62 359 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 ZNRF3Q9ULT6 936 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 COQ4Q9Y3A0 265 aa16.22■□□□□ 0.19
CLSTN1-201ENST00000361311 MYPNQ86TC9 1320 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 HNRNPLP14866 589 aaKnown RBP eCLIP16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 CLCN3P51790 818 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 PDCD4Q53EL6 469 aaKnown RBP16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 LDLRAP1Q5SW96 308 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 TAGAPQ8N103 731 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 SVOPQ8N4V2 548 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 LIN28AQ9H9Z2 209 aaKnown RBP16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 CDHR5Q9HBB8 845 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 TMEM216Q9P0N5 145 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 LIMD1Q9UGP4 676 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 NCF1BA6NI72 391 aaPredicted RBP16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 NCF1CA8MVU1 366 aaPredicted RBP16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 RAD51BO15315 384 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 CSH1P0DML2 217 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 CSH2P0DML3 217 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 NCF1P14598 390 aaPredicted RBP16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 HLA-DPA1P20036 260 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 ITGAXP20702 1163 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 CSTF3Q12996 717 aaKnown RBP16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 TRAF3Q13114 568 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 OR52E8Q6IFG1 317 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 CBR4Q8N4T8 237 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 DNAJB14Q8TBM8 379 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 ADAM32Q8TC27 787 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 DEPDC7Q96QD5 511 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 ZNF556Q9HAH1 456 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 GIN1Q9NXP7 522 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 USE1Q9NZ43 259 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 TCRBV7S3A2A0A539 114 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 TFEBP19484 476 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 GAD2Q05329 585 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 ITGA7Q13683 1181 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 UGCGQ16739 394 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 ARMCX4Q5H9R4 360 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 MRNIPQ6NTE8 343 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 PSTKQ8IV42 348 aaKnown RBP16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 EID3Q8N140 333 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 ZNF670Q9BS34 389 aa16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 SCAF8Q9UPN6 1271 aaKnown RBP16.21■□□□□ 0.19
CLSTN1-201ENST00000361311 ERI2A8K979 691 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms