RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 FCRL3Q96P31 734 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 PGLYRP2Q96PD5 576 aa18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 ALG13Q9NP73 1137 aaKnown RBP18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 MARCH5Q9NX47 278 aa18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 SIRPGQ9P1W8 387 aa18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 NUDT5Q9UKK9 219 aa18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 MIA3Q5JRA6 1907 aa18.66■□□□□ 0.58
PDLIM7-203ENST00000359895 ERVK-10P10266 1014 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 RHOQP17081 205 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 NDST2P52849 883 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 USP46P62068 366 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 RPL10AP62906 217 aaKnown RBP18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 OLIG2Q13516 323 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 ARMC3Q5W041 872 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 ARHGAP36Q6ZRI8 547 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 ANKS3Q6ZW76 656 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 NLRP9Q7RTR0 991 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 CCDC91Q7Z6B0 441 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 NUDCD3Q8IVD9 361 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 ATAD1Q8NBU5 361 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 USP33Q8TEY7 942 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 FATE1Q969F0 183 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 E2F7Q96AV8 911 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 TBL1YQ9BQ87 522 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 MYLK2Q9H1R3 596 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 NSMCE4AQ9NXX6 385 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 CHKBQ9Y259 395 aa18.65■□□□□ 0.58
PDLIM7-203ENST00000359895 SCN5AQ14524 2016 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 ZCWPW2A0A1B0GU75 182 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 MTMR11A4FU01 709 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 TPP1O14773 563 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 ATP9BO43861 1147 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 NEBLO76041 1014 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 CSE1LP55060 971 aaKnown RBP18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 SLC20A2Q08357 652 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 CERCAMQ5T4B2 595 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 PIK3R6Q5UE93 754 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 CES3Q6UWW8 571 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 OTOP3Q7RTS5 596 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 C14orf80Q86SX3 495 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 UMODL1-AS1Q8N2C9 162 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 ISL2Q96A47 359 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 BTN2A3PQ96KV6 586 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 C7orf26Q96N11 449 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 RBBP8Q99708 897 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 KIFC1Q9BW19 673 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 ZYG11BQ9C0D3 744 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 PRDM5Q9NQX1 630 aaPredicted RBP18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.64■□□□□ 0.582e-6■■■■□ 24.3
PDLIM7-203ENST00000359895 MTO1Q9Y2Z2 717 aaKnown RBP18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 PSAT1Q9Y617 370 aa18.64■□□□□ 0.58
PDLIM7-203ENST00000359895 TBC1D4O60343 1298 aa18.64■□□□□ 0.57
PDLIM7-203ENST00000359895 PARNO95453 639 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-203ENST00000359895 ALDOAP04075 364 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-203ENST00000359895 BPGMP07738 259 aa18.64■□□□□ 0.57
PDLIM7-203ENST00000359895 HAPLN1P10915 354 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-203ENST00000359895 ARPP19P56211 112 aa18.64■□□□□ 0.57
PDLIM7-203ENST00000359895 EFEMP1Q12805 493 aa18.64■□□□□ 0.57
PDLIM7-203ENST00000359895 ZNF683Q8IZ20 524 aa18.64■□□□□ 0.57
PDLIM7-203ENST00000359895 ERP27Q96DN0 273 aa18.64■□□□□ 0.57
PDLIM7-203ENST00000359895 CEP295NLQ96MC4 621 aa18.64■□□□□ 0.57
PDLIM7-203ENST00000359895 ENTPD7Q9NQZ7 604 aa18.64■□□□□ 0.57
PDLIM7-203ENST00000359895 KLC4Q9NSK0 619 aa18.64■□□□□ 0.57
PDLIM7-203ENST00000359895 TMEM248Q9NWD8 314 aa18.64■□□□□ 0.57
PDLIM7-203ENST00000359895 MICAL3Q7RTP6 2002 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 GALTP07902 379 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 TYK2P29597 1187 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 GATMP50440 423 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 SERPINB8P50452 374 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 PAPOLAP51003 745 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 KPNA1P52294 538 aaPredicted RBP18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 ARFIP2P53365 341 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 LIMK2P53671 638 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 TMPRSS15P98073 1019 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 CDK18Q07002 472 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 PDE1CQ14123 709 aaPredicted RBP18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 MGAT5BQ3V5L5 792 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 MS4A13Q5J8X5 152 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 PCID2Q5JVF3 399 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 TEDDM1Q5T9Z0 273 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 PDPK2PQ6A1A2 396 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 CYB5D1Q6P9G0 228 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 STRA8Q7Z7C7 330 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 KCNMB4Q86W47 210 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 CRIPAKQ8N1N5 446 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 TTC9BQ8N6N2 239 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 ANKLE1Q8NAG6 615 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 TET1Q8NFU7 2136 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 PTCD2Q8WV60 388 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 KLHL29Q96CT2 875 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 APOL2Q9BQE5 337 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 RBM22Q9NW64 420 aaKnown RBP eCLIP18.63■□□□□ 0.571e-6■□□□□ 9.2
PDLIM7-203ENST00000359895 UBP1Q9NZI7 540 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 MPP6Q9NZW5 540 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 SLC17A6Q9P2U8 582 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 IPO11Q9UI26 975 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 CENPFP49454 3210 aa18.63■□□□□ 0.57
PDLIM7-203ENST00000359895 IGLV3-10A0A075B6K4 115 aa18.62■□□□□ 0.57
PDLIM7-203ENST00000359895 TBKBP1A7MCY6 615 aa18.62■□□□□ 0.57
PDLIM7-203ENST00000359895 TIMM44O43615 452 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms