RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 CTRB1P17538 263 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 MAPK4P31152 587 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 HCAR3P49019 387 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 NDST2P52849 883 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 C21orf58P58505 322 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 PSME3P61289 254 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 ARHGAP8P85298 464 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 DPYSL3Q14195 570 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 SQLEQ14534 574 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 CTF1Q16619 201 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 AASDHQ4L235 1098 aaPredicted RBP4.6□□□□□ -1.67
PTPN22-201ENST00000359785 TMTC4Q5T4D3 741 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 C1orf146Q5VVC0 180 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 KCTD11Q693B1 232 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 TRIM68Q6AZZ1 485 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 CTRB2Q6GPI1 263 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 METTL2BQ6P1Q9 378 aaKnown RBP4.6□□□□□ -1.67
PTPN22-201ENST00000359785 ATG14Q6ZNE5 492 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 DET1Q7L5Y6 550 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 GPR155Q7Z3F1 870 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 KDELC2Q7Z4H8 507 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 PRPF39Q86UA1 669 aaKnown RBP4.6□□□□□ -1.67
PTPN22-201ENST00000359785 ALYREFQ86V81 257 aaKnown RBP4.6□□□□□ -1.67
PTPN22-201ENST00000359785 ZC3HC1Q86WB0 502 aaKnown RBP4.6□□□□□ -1.67
PTPN22-201ENST00000359785 EPHX4Q8IUS5 362 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 DCLK2Q8N568 766 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 MTMR14Q8NCE2 650 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 DNAJB8Q8NHS0 232 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 RMND5BQ96G75 393 aaPredicted RBP4.6□□□□□ -1.67
PTPN22-201ENST00000359785 FAM161BQ96MY7 647 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 ZNF300Q96RE9 604 aaPredicted RBP4.6□□□□□ -1.67
PTPN22-201ENST00000359785 CAMKK2Q96RR4 588 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 TCF12Q99081 682 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 DHRS9Q9BPW9 319 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 C20orf27Q9GZN8 174 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 GOPCQ9HD26 462 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 SAYSD1Q9NPB0 183 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 FBXO6Q9NRD1 293 aaPredicted RBP4.6□□□□□ -1.67
PTPN22-201ENST00000359785 OXSMQ9NWU1 459 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 GID8Q9NWU2 228 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 RAB20Q9NX57 234 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 HSPBP1Q9NZL4 362 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 CCNL1Q9UK58 526 aaPredicted RBP4.6□□□□□ -1.67
PTPN22-201ENST00000359785 STUB1Q9UNE7 303 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 SAC3D1A6NKF1 404 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 FAM86B1E9PN63 330 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 TULP3O75386 442 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 PIAS1O75925 651 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 FAM13AO94988 1023 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 OR6B1O95007 311 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 IL18RAPO95256 599 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 FAM86B2P0C5J1 330 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 GSTT2P0CG29 244 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 GSTT2BP0CG30 244 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 TSPY3P0CV98 308 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 TSPY8P0CW00 308 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 NPR1P16066 1061 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 ME2P23368 584 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 HIBADHP31937 336 aaKnown RBP4.6□□□□□ -1.67
PTPN22-201ENST00000359785 MAGEA11P43364 429 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 PTPN9P43378 593 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 MXI1P50539 228 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 CSNK2BP67870 215 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 BASP1P80723 227 aaKnown RBP4.6□□□□□ -1.67
PTPN22-201ENST00000359785 SURF1Q15526 300 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 UBE2UQ5VVX9 321 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 SIGIRRQ6IA17 410 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 IDO2Q6ZQW0 420 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 CDHR3Q6ZTQ4 885 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 TMEM135Q86UB9 458 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 PEX5LQ8IYB4 626 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 TCTE3Q8IZS6 198 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 ARFGAP1Q8N6T3 406 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 KYQ8NBH2 561 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 DDHD1Q8NEL9 900 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 HMGCLL1Q8TB92 370 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 DYNC2LI1Q8TCX1 351 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 SEMA4DQ92854 862 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 RPL3LQ92901 407 aaKnown RBP4.6□□□□□ -1.67
PTPN22-201ENST00000359785 SH3YL1Q96HL8 342 aaPredicted RBP4.6□□□□□ -1.67
PTPN22-201ENST00000359785 NSMCE3Q96MG7 304 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 RIPOR3Q96MK2 946 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 NT5C1BQ96P26 610 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 PSMB7Q99436 277 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 ACO2Q99798 780 aaKnown RBP4.6□□□□□ -1.67
PTPN22-201ENST00000359785 C9orf16Q9BUW7 83 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 CCDC32Q9BV29 185 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 TRIM54Q9BYV2 358 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 GGA3Q9NZ52 723 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 ACTR3BQ9P1U1 418 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 LRP2BPQ9P2M1 347 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 DNPEPQ9ULA0 475 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 TRAF6Q9Y4K3 522 aa4.6□□□□□ -1.67
PTPN22-201ENST00000359785 CITO14578 2027 aa4.59□□□□□ -1.67
PTPN22-201ENST00000359785 POLRMTO00411 1230 aaKnown RBP4.59□□□□□ -1.67
PTPN22-201ENST00000359785 BACH1O14867 736 aa4.59□□□□□ -1.67
PTPN22-201ENST00000359785 COBLO75128 1261 aa4.59□□□□□ -1.67
PTPN22-201ENST00000359785 KRT13P13646 458 aa4.59□□□□□ -1.67
PTPN22-201ENST00000359785 KDELR1P24390 212 aa4.59□□□□□ -1.67
PTPN22-201ENST00000359785 PTX3P26022 381 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms