RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 SLITRK1Q96PX8 696 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 MNTQ99583 582 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 MUC3BQ9H195 1237 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 IKZF3Q9UKT9 509 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 DGKBQ9Y6T7 804 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 FRMPD4Q14CM0 1322 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 IDH2P48735 452 aaKnown RBP8.9□□□□□ -0.99
COL6A6-201ENST00000358511 C6orf183Q5T699 404 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 PLET1Q6UQ28 207 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 SAPCD2Q86UD0 394 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 SPATA2LQ8IUW3 424 aaPredicted RBP8.9□□□□□ -0.99
COL6A6-201ENST00000358511 PRELID2Q8N945 189 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 CHST7Q9NS84 486 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 PLA2G4CQ9UP65 541 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 GNEQ9Y223 722 aaKnown RBP8.9□□□□□ -0.99
COL6A6-201ENST00000358511 USP31Q70CQ4 1352 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 MED24O75448 989 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 CCR3P51677 355 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 KPNA1P52294 538 aaPredicted RBP8.9□□□□□ -0.99
COL6A6-201ENST00000358511 BCAT1P54687 386 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 MYL6P60660 151 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 CDC42P60953 191 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 FAR1Q8WVX9 515 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 HTR3CQ8WXA8 447 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 WDCPQ9H6R7 721 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 XPNPEP3Q9NQH7 507 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 IFT172Q9UG01 1749 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 ZC3H4Q9UPT8 1303 aaKnown RBP8.9□□□□□ -0.99
COL6A6-201ENST00000358511 GRIN2DO15399 1336 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 G3V2T6 193 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 CYP19A1P11511 503 aaPredicted RBP8.9□□□□□ -0.99
COL6A6-201ENST00000358511 PEX2P28328 305 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 LPCAT4Q643R3 524 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 PRR23BQ6ZRT6 265 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 TMEM110Q86TL2 294 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 ERI1Q8IV48 349 aaKnown RBP8.9□□□□□ -0.99
COL6A6-201ENST00000358511 SPPL2AQ8TCT8 520 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 CINPQ9BW66 212 aaPredicted RBP8.9□□□□□ -0.99
COL6A6-201ENST00000358511 DPY30Q9C005 99 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 KCNH7Q9NS40 1196 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 SLC38A7Q9NVC3 462 aa8.9□□□□□ -0.99
COL6A6-201ENST00000358511 A0A1W2PQ72 361 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 HACD1B0YJ81 288 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 ITGA7Q13683 1181 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 POU6F1Q14863 301 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 LIPMQ5VYY2 423 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 CIAPIN1Q6FI81 312 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 LIN54Q6MZP7 749 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 UTS2BQ765I0 119 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 DNAAF5Q86Y56 855 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 C12orf56Q8IXR9 622 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 TBC1D21Q8IYX1 336 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 MYO1HQ8N1T3 1032 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 RDH11Q8TC12 318 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 LRRC20Q8TCA0 184 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 STARD8Q92502 1023 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 YME1L1Q96TA2 773 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 CRTAMO95727 393 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 SERPIND1P05546 499 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 ITGA2BP08514 1039 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 IFNGR2P38484 337 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 MIIPQ5JXC2 388 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 CAMKK1Q8N5S9 505 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 RHOBTB2Q9BYZ6 727 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 NMUR2Q9GZQ4 415 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 IL22Q9GZX6 179 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 MAN1C1Q9NR34 630 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 DNAJB4Q9UDY4 337 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 A0A087X0B3 334 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 E7ENX8 843 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 PLK4O00444 970 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 MT-CO1P00395 513 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 IDO1P14902 403 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 HPCAL1P37235 193 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 DPYSL3Q14195 570 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 MTX3Q5HYI7 312 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 XRRA1Q6P2D8 792 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 PIGWQ7Z7B1 504 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 NLGN1Q8N2Q7 840 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 OR56A4Q8NGH8 313 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 TSPAN18Q96SJ8 248 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 CLPBQ9H078 707 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 ARL8BQ9NVJ2 186 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 STK32BQ9NY57 414 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 RIMS1Q86UR5 1692 aaKnown RBP8.89□□□□□ -0.99
COL6A6-201ENST00000358511 HDAC3O15379 428 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 EPN2O95208 641 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 CNPP09543 421 aaKnown RBP8.89□□□□□ -0.99
COL6A6-201ENST00000358511 ATF6P18850 670 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 KHDC1Q4VXA5 237 aaKnown RBP8.89□□□□□ -0.99
COL6A6-201ENST00000358511 ZNF470Q6ECI4 717 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 ELMOD1Q8N336 334 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 PCDH20Q8N6Y1 951 aaKnown RBP8.89□□□□□ -0.99
COL6A6-201ENST00000358511 MARK4Q96L34 752 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 MARCH7Q9H992 704 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 COMMD9Q9P000 198 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 PRKAG3Q9UGI9 489 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 PNMA8BQ9ULN7 279 aaPredicted RBP8.89□□□□□ -0.99
COL6A6-201ENST00000358511 BCLAF3A2AJT9 711 aaKnown RBP8.89□□□□□ -0.99
COL6A6-201ENST00000358511 RCCD1A6NED2 376 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms