RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 HCN2Q9UL51 889 aa15.21■□□□□ 0.02
CCNE1-202ENST00000357943 MTF2Q9Y483 593 aaPredicted RBP15.21■□□□□ 0.02
CCNE1-202ENST00000357943 ACTL7AQ9Y615 435 aa15.21■□□□□ 0.02
CCNE1-202ENST00000357943 ARHGAP42A6NI28 874 aa15.2■□□□□ 0.02
CCNE1-202ENST00000357943 J3KR12 359 aa15.2■□□□□ 0.02
CCNE1-202ENST00000357943 APOC4-APOC2K7ER74 178 aa15.2■□□□□ 0.02
CCNE1-202ENST00000357943 CES2O00748 559 aa15.2■□□□□ 0.02
CCNE1-202ENST00000357943 ZMPSTE24O75844 475 aa15.2■□□□□ 0.02
CCNE1-202ENST00000357943 APOC2P02655 101 aa15.2■□□□□ 0.02
CCNE1-202ENST00000357943 TARSP26639 723 aaKnown RBP15.2■□□□□ 0.02
CCNE1-202ENST00000357943 GARSP41250 739 aaKnown RBP15.2■□□□□ 0.02
CCNE1-202ENST00000357943 NR2C2P49116 596 aa15.2■□□□□ 0.02
CCNE1-202ENST00000357943 SEC13P55735 322 aa15.2■□□□□ 0.02
CCNE1-202ENST00000357943 ARF5P84085 180 aa15.2■□□□□ 0.02
CCNE1-202ENST00000357943 GALNT2Q10471 571 aa15.2■□□□□ 0.02
CCNE1-202ENST00000357943 EIF4HQ15056 248 aaKnown RBP15.2■□□□□ 0.02
CCNE1-202ENST00000357943 LINGO4Q6UY18 593 aa15.2■□□□□ 0.02
CCNE1-202ENST00000357943 LEKR1Q6ZMV7 388 aa15.2■□□□□ 0.02
CCNE1-202ENST00000357943 B4GALNT4Q76KP1 1039 aa15.2■□□□□ 0.02
CCNE1-202ENST00000357943 ZNF592Q92610 1267 aa15.2■□□□□ 0.02
CCNE1-202ENST00000357943 RPL10LQ96L21 214 aaKnown RBP15.2■□□□□ 0.02
CCNE1-202ENST00000357943 OLFM3Q96PB7 478 aa15.2■□□□□ 0.02
CCNE1-202ENST00000357943 TBC1D17Q9HA65 648 aa15.2■□□□□ 0.02
CCNE1-202ENST00000357943 LTB4R2Q9NPC1 389 aa15.2■□□□□ 0.02
CCNE1-202ENST00000357943 RBM12Q9NTZ6 932 aaKnown RBP15.2■□□□□ 0.02
CCNE1-202ENST00000357943 IPO11Q9UI26 975 aaKnown RBP15.2■□□□□ 0.02
CCNE1-202ENST00000357943 R3HDM2Q9Y2K5 976 aaKnown RBP15.2■□□□□ 0.02
CCNE1-202ENST00000357943 STARD13Q9Y3M8 1113 aa15.2■□□□□ 0.02
CCNE1-202ENST00000357943 NUP205Q92621 2012 aa15.19■□□□□ 0.02
CCNE1-202ENST00000357943 KDELR3O43731 214 aa15.19■□□□□ 0.02
CCNE1-202ENST00000357943 MAFKO60675 156 aa15.19■□□□□ 0.02
CCNE1-202ENST00000357943 MT-CO1P00395 513 aa15.19■□□□□ 0.02
CCNE1-202ENST00000357943 TNFRSF4P43489 277 aa15.19■□□□□ 0.02
CCNE1-202ENST00000357943 KIR2DL1P43626 348 aaPredicted RBP15.19■□□□□ 0.02
CCNE1-202ENST00000357943 STK19P49842 368 aaPredicted RBP15.19■□□□□ 0.02
CCNE1-202ENST00000357943 ECT2LQ008S8 904 aa15.19■□□□□ 0.02
CCNE1-202ENST00000357943 OTUD4Q01804 1114 aaKnown RBP15.19■□□□□ 0.02
CCNE1-202ENST00000357943 UBXN2BQ14CS0 331 aa15.19■□□□□ 0.02
CCNE1-202ENST00000357943 PTPRNQ16849 979 aa15.19■□□□□ 0.02
CCNE1-202ENST00000357943 LONRF2Q1L5Z9 754 aa15.19■□□□□ 0.02
CCNE1-202ENST00000357943 NUDT18Q6ZVK8 323 aa15.19■□□□□ 0.02
CCNE1-202ENST00000357943 ATPAF2Q8N5M1 289 aa15.19■□□□□ 0.02
CCNE1-202ENST00000357943 ACTL9Q8TC94 416 aa15.19■□□□□ 0.02
CCNE1-202ENST00000357943 ACDQ96AP0 544 aa15.19■□□□□ 0.02
CCNE1-202ENST00000357943 LGMNQ99538 433 aa15.19■□□□□ 0.02
CCNE1-202ENST00000357943 FAM170BA6NMN3 283 aa15.18■□□□□ 0.02
CCNE1-202ENST00000357943 KIF2AO00139 706 aaPredicted RBP15.18■□□□□ 0.02
CCNE1-202ENST00000357943 STK25O00506 426 aa15.18■□□□□ 0.02
CCNE1-202ENST00000357943 CD160O95971 181 aa15.18■□□□□ 0.02
CCNE1-202ENST00000357943 PDGFBP01127 241 aaPredicted RBP15.18■□□□□ 0.02
CCNE1-202ENST00000357943 TUBB4AP04350 444 aa15.18■□□□□ 0.02
CCNE1-202ENST00000357943 ATP5BP06576 529 aaKnown RBP15.18■□□□□ 0.02
CCNE1-202ENST00000357943 DLDP09622 509 aaKnown RBP15.18■□□□□ 0.02
CCNE1-202ENST00000357943 CHRNB1P11230 501 aa15.18■□□□□ 0.02
CCNE1-202ENST00000357943 MX2P20592 715 aa15.18■□□□□ 0.02
CCNE1-202ENST00000357943 FZD5Q13467 585 aa15.18■□□□□ 0.02
CCNE1-202ENST00000357943 NOMO1Q15155 1222 aa15.18■□□□□ 0.02
CCNE1-202ENST00000357943 SIX1Q15475 284 aaPredicted RBP15.18■□□□□ 0.02
CCNE1-202ENST00000357943 EGFLAMQ63HQ2 1017 aa15.18■□□□□ 0.02
CCNE1-202ENST00000357943 TRIM67Q6ZTA4 783 aa15.18■□□□□ 0.02
CCNE1-202ENST00000357943 ZC3H18Q86VM9 953 aaKnown RBP15.18■□□□□ 0.02
CCNE1-202ENST00000357943 CCNYQ8ND76 341 aa15.18■□□□□ 0.02
CCNE1-202ENST00000357943 HDAC11Q96DB2 347 aa15.18■□□□□ 0.02
CCNE1-202ENST00000357943 MYO19Q96H55 970 aa15.18■□□□□ 0.02
CCNE1-202ENST00000357943 CAPZA3Q96KX2 299 aa15.18■□□□□ 0.02
CCNE1-202ENST00000357943 MRGPRX3Q96LB0 322 aa15.18■□□□□ 0.02
CCNE1-202ENST00000357943 PDFQ9HBH1 243 aa15.18■□□□□ 0.02
CCNE1-202ENST00000357943 TTC7AQ9ULT0 858 aaPredicted RBP15.18■□□□□ 0.02
CCNE1-202ENST00000357943 HPCAL4Q9UM19 191 aa15.18■□□□□ 0.02
CCNE1-202ENST00000357943 MRPS17Q9Y2R5 130 aaKnown RBP15.18■□□□□ 0.02
CCNE1-202ENST00000357943 CHD5Q8TDI0 1954 aa15.18■□□□□ 0.02
CCNE1-202ENST00000357943 K7ERQ8 282 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 NCAM2O15394 837 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 TIMM44O43615 452 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 PRAMEF11O60813 436 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 RNF40O75150 1001 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 CHRM1P11229 460 aaPredicted RBP15.17■□□□□ 0.02
CCNE1-202ENST00000357943 ALADP13716 330 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 TIE1P35590 1138 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 SULT2A1Q06520 285 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 C2orf27AQ580R0 203 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 FAM182AQ5T1J6 154 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 CREG2Q8IUH2 290 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 ZNF513Q8N8E2 541 aaPredicted RBP15.17■□□□□ 0.02
CCNE1-202ENST00000357943 ACTRT1Q8TDG2 376 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 ATG4AQ8WYN0 398 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 ACOX2Q99424 681 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 C10orf88Q9H8K7 445 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 SP110Q9HB58 689 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 SLCO3A1Q9UIG8 710 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 ERVW-1Q9UQF0 538 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 RAD54BQ9Y620 910 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 NYNRINQ9P2P1 1898 aaKnown RBP15.17■□□□□ 0.02
CCNE1-202ENST00000357943 WASH3PC4AMC7 463 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 PGRMC1O00264 195 aaKnown RBP15.17■□□□□ 0.02
CCNE1-202ENST00000357943 PPP1R12AO14974 1030 aaPredicted RBP15.17■□□□□ 0.02
CCNE1-202ENST00000357943 PEX11BO96011 259 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 ASLP04424 464 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 IL10RBQ08334 325 aa15.17■□□□□ 0.02
CCNE1-202ENST00000357943 AP1B1Q10567 949 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms