RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 RETSATQ6NUM9 610 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 TUBA3EQ6PEY2 450 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 PJA1Q8NG27 643 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 OR52L1Q8NGH7 329 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 FAM172AQ8WUF8 416 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 NCKAP1Q9Y2A7 1128 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 TNNI3P19429 210 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 RPL21P46778 160 aaKnown RBP13.04□□□□□ -0.32
SMC4-202ENST00000357388 ZNF135P52742 658 aaPredicted RBP13.04□□□□□ -0.32
SMC4-202ENST00000357388 FOLH1Q04609 750 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 NRF1Q16656 503 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 POU5F2Q8N7G0 328 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 ZSCAN18Q8TBC5 510 aaPredicted RBP13.04□□□□□ -0.32
SMC4-202ENST00000357388 CERKQ8TCT0 537 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 USP7Q93009 1102 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 PIF1Q9H611 641 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 ADARB2Q9NS39 739 aaKnown RBP13.04□□□□□ -0.32
SMC4-202ENST00000357388 LEF1Q9UJU2 399 aaPredicted RBP13.04□□□□□ -0.32
SMC4-202ENST00000357388 ZNF879B4DU55 563 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 SMIM22K7EJ46 135 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 SEC22BO75396 215 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 ICAM1P05362 532 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 CKBP12277 381 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 GSSP48637 474 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 GPR15P49685 360 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 CDK9P50750 372 aaKnown RBP13.04□□□□□ -0.32
SMC4-202ENST00000357388 ST3GAL1Q11201 340 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 MIB1Q86YT6 1006 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 ZNF557Q8N988 423 aaPredicted RBP13.04□□□□□ -0.32
SMC4-202ENST00000357388 QRFPRQ96P65 431 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 SPATA5L1Q9BVQ7 753 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 CIPCQ9C0C6 399 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 GIN1Q9NXP7 522 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 ZNF112Q9UJU3 913 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 TFR2Q9UP52 801 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 PPP2R3BQ9Y5P8 575 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 CCDC189A1A4V9 331 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.03□□□□□ -0.32
SMC4-202ENST00000357388 CYB561D2O14569 222 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 THP07101 528 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 COX4I1P13073 169 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 ZNF12P17014 697 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 TTI2Q6NXR4 508 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 ZDHHC17Q8IUH5 632 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 MINDY2Q8NBR6 621 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 PIWIL2Q8TC59 973 aaKnown RBP13.03□□□□□ -0.32
SMC4-202ENST00000357388 CGRRF1Q99675 332 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 TBC1D10AQ9BXI6 508 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 DSN1Q9H410 356 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 TAS2R13Q9NYV9 303 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 PTGFRNQ9P2B2 879 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.03□□□□□ -0.32
SMC4-202ENST00000357388 CNTNAP5Q8WYK1 1306 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 FAM205CA6NFA0 338 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 OR6A2O95222 327 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 ALDH2P05091 517 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 ERVK-9P63128 1117 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 RIPK1Q13546 671 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 MILR1Q7Z6M3 343 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 SH2D3AQ9BRG2 576 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 C1QTNF7Q9BXJ2 289 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 ARMCX1Q9P291 453 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 CCNT2O60583 730 aaKnown RBP13.03□□□□□ -0.32
SMC4-202ENST00000357388 ERN1O75460 977 aaKnown RBP13.03□□□□□ -0.32
SMC4-202ENST00000357388 NAMPTP43490 491 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 SWI5Q1ZZU3 235 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 RBM20Q5T481 1227 aaKnown RBP13.03□□□□□ -0.32
SMC4-202ENST00000357388 MPZL3Q6UWV2 235 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 MFSD7Q6UXD7 560 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 ADCY4Q8NFM4 1077 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 RGSL1A5PLK6 1076 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 XYLBO75191 536 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 SNRPB2P08579 225 aaKnown RBP13.03□□□□□ -0.32
SMC4-202ENST00000357388 FGRP09769 529 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 ATF6P18850 670 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 TCEAL5Q5H9L2 206 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 GPR107Q5VW38 600 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 TTC7BQ86TV6 843 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 ACSF2Q96CM8 615 aaPredicted RBP13.03□□□□□ -0.32
SMC4-202ENST00000357388 MTG1Q9BT17 334 aaPredicted RBP13.03□□□□□ -0.32
SMC4-202ENST00000357388 AP4B1Q9Y6B7 739 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 MYO5CQ9NQX4 1742 aa13.03□□□□□ -0.32
SMC4-202ENST00000357388 PCDH8O95206 1070 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 RPN2P04844 631 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 POLR2EP19388 210 aaKnown RBP13.02□□□□□ -0.32
SMC4-202ENST00000357388 HKDC1Q2TB90 917 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 DDI2Q5TDH0 399 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 KIAA1683Q9H0B3 1180 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 OSGEPL1Q9H4B0 414 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 LRRC4BQ9NT99 713 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 CCDC167Q9P0B6 97 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 PRKAG3Q9UGI9 489 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 HPSEQ9Y251 543 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 ZMYM2Q9UBW7 1377 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 TEX46H3BTG2 121 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 PSME3P61289 254 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 IFI35P80217 286 aaPredicted RBP13.02□□□□□ -0.32
SMC4-202ENST00000357388 TRIM32Q13049 653 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 ACAP1Q15027 740 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 ATP13A5Q4VNC0 1218 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms