RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 KIAA2013Q8IYS2 634 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 WDTC1Q8N5D0 677 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 CHPT1Q8WUD6 406 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 CAPSLQ8WWF8 208 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 BEGAINQ9BUH8 593 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 C1orf50Q9BV19 199 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 RAB6CQ9H0N0 254 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 AGO4Q9HCK5 861 aaKnown RBP7.77□□□□□ -1.17
BRCA1-201ENST00000352993 SNX15Q9NRS6 342 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 SEPT3Q9UH03 358 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 GIT1Q9Y2X7 761 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 KRT75O95678 551 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 MT-CO1P00395 513 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 HSPA8P11142 646 aaKnown RBP7.77□□□□□ -1.17
BRCA1-201ENST00000352993 PABPC1P11940 636 aaKnown RBP7.77□□□□□ -1.17
BRCA1-201ENST00000352993 EPHX2P34913 555 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 RAD23AP54725 363 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 TPD52P55327 224 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-201ENST00000352993 AGKQ53H12 422 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 HEATR6Q6AI08 1181 aaKnown RBP7.77□□□□□ -1.17
BRCA1-201ENST00000352993 SNX29P2Q8IUI4 249 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 C4orf19Q8IY42 314 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 DCLK2Q8N568 766 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.77□□□□□ -1.17
BRCA1-201ENST00000352993 PLD5Q8N7P1 536 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 NIPA2Q8N8Q9 360 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 GMCL1P1Q8NEA9 526 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 UBA3Q8TBC4 463 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 ITPKCQ96DU7 683 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 FBXL20Q96IG2 436 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 PGLYRP2Q96PD5 576 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 RNF157Q96PX1 679 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 CPXM1Q96SM3 734 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 SNX25Q9H3E2 840 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 EHD1Q9H4M9 534 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 PLAC1Q9HBJ0 212 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 PKD2L2Q9NZM6 624 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 CNOT6Q9ULM6 557 aaKnown RBP7.77□□□□□ -1.17
BRCA1-201ENST00000352993 AP4E1Q9UPM8 1137 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-201ENST00000352993 NRP1O14786 923 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 PFDN6O15212 129 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 ENTPD3O75355 529 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 HDCP19113 662 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 TFEBP19484 476 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 TPTEP56180 551 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 IRF9Q00978 393 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 PRKCQQ04759 706 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 ZNF699Q32M78 642 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 ARL13AQ5H913 290 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-201ENST00000352993 ANKRD26P1Q6NSI1 321 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 APOBEC3HQ6NTF7 200 aaKnown RBP7.76□□□□□ -1.17
BRCA1-201ENST00000352993 SWSAP1Q6NVH7 229 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 C15orf39Q6ZRI6 1047 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 STRA8Q7Z7C7 330 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 SGF29Q96ES7 293 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 NSMCE3Q96MG7 304 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 ADI1Q9BV57 179 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 NPLQ9BXD5 320 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-201ENST00000352993 ZNF518BQ9C0D4 1074 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 ING2Q9H160 280 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 ADNPQ9H2P0 1102 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 SOX17Q9H6I2 414 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-201ENST00000352993 PALMDQ9NP74 551 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 SMOXQ9NWM0 555 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 FBXO40Q9UH90 709 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 TLK1Q9UKI8 766 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 ERGIC3Q9Y282 383 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 V9GYQ6 96 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 CDK5RAP2Q96SN8 1893 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 ANKRD12Q6UB98 2062 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 M0QYV0 167 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 NFIBO00712 420 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 TOR1BO14657 336 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 CLASP2O75122 1294 aaKnown RBP7.76□□□□□ -1.17
BRCA1-201ENST00000352993 ALDH2P05091 517 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 CYP2C9P11712 490 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 TCEA1P23193 301 aaKnown RBP7.76□□□□□ -1.17
BRCA1-201ENST00000352993 GLDCP23378 1020 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 TKTP29401 623 aaKnown RBP7.76□□□□□ -1.17
BRCA1-201ENST00000352993 AVPR1AP37288 418 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 GRIA4P48058 902 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 PGGT1BP53609 377 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 CDH8P55286 799 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 RHDQ02161 417 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 DNASE1L3Q13609 305 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 KCNJ8Q15842 424 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 RSBN1LQ6PCB5 846 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-201ENST00000352993 RNF19BQ6ZMZ0 732 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 TIFABQ6ZNK6 161 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 IGFN1Q86VF2 1251 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 IFNEQ86WN2 208 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 DHFR2Q86XF0 187 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 NAT16Q8N8M0 369 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 CMASQ8NFW8 434 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-201ENST00000352993 CANT1Q8WVQ1 401 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 RXFP2Q8WXD0 754 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 ASB9Q96DX5 294 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 NRBF2Q96F24 287 aa7.76□□□□□ -1.17
BRCA1-201ENST00000352993 PEBP4Q96S96 227 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms