RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 AAK1Q2M2I8 961 aa27.67■■■□□ 2.02
SSBP4-202ENST00000348495 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.67■■■□□ 2.022e-7■■■□□ 16.4
SSBP4-202ENST00000348495 GLIS1Q8NBF1 620 aa27.67■■■□□ 2.02
SSBP4-202ENST00000348495 PDFQ9HBH1 243 aa27.67■■■□□ 2.02
SSBP4-202ENST00000348495 GTSE1Q9NYZ3 720 aa27.67■■■□□ 2.02
SSBP4-202ENST00000348495 J3KR12 359 aa27.66■■■□□ 2.02
SSBP4-202ENST00000348495 MTSS1O43312 755 aa27.66■■■□□ 2.02
SSBP4-202ENST00000348495 KDELR3O43731 214 aa27.66■■■□□ 2.02
SSBP4-202ENST00000348495 PRAMEF11O60813 436 aa27.66■■■□□ 2.02
SSBP4-202ENST00000348495 CLCN6P51797 869 aa27.66■■■□□ 2.02
SSBP4-202ENST00000348495 IL10RBQ08334 325 aa27.66■■■□□ 2.02
SSBP4-202ENST00000348495 WASHC5Q12768 1159 aa27.66■■■□□ 2.02
SSBP4-202ENST00000348495 TEX35Q5T0J7 233 aa27.66■■■□□ 2.02
SSBP4-202ENST00000348495 IL31Q6EBC2 164 aa27.66■■■□□ 2.02
SSBP4-202ENST00000348495 TIGD7Q6NT04 549 aaPredicted RBP27.66■■■□□ 2.02
SSBP4-202ENST00000348495 SYDE1Q6ZW31 735 aaPredicted RBP27.66■■■□□ 2.02
SSBP4-202ENST00000348495 GSTA5Q7RTV2 222 aa27.66■■■□□ 2.02
SSBP4-202ENST00000348495 KIAA0907Q7Z7F0 614 aaPredicted RBP27.66■■■□□ 2.02
SSBP4-202ENST00000348495 C12orf40Q86WS4 652 aa27.66■■■□□ 2.02
SSBP4-202ENST00000348495 MAML1Q92585 1016 aa27.66■■■□□ 2.02
SSBP4-202ENST00000348495 SPON2Q9BUD6 331 aa27.66■■■□□ 2.02
SSBP4-202ENST00000348495 ATP13A1Q9HD20 1204 aa27.66■■■□□ 2.02
SSBP4-202ENST00000348495 ABCB8Q9NUT2 735 aa27.66■■■□□ 2.02
SSBP4-202ENST00000348495 IGSF9Q9P2J2 1179 aa27.66■■■□□ 2.02
SSBP4-202ENST00000348495 INTS6Q9UL03 887 aaKnown RBP27.66■■■□□ 2.02
SSBP4-202ENST00000348495 FAM187AA6NFU0 413 aa27.65■■■□□ 2.02
SSBP4-202ENST00000348495 KCNK1O00180 336 aa27.65■■■□□ 2.02
SSBP4-202ENST00000348495 MATN3O15232 486 aa27.65■■■□□ 2.02
SSBP4-202ENST00000348495 CISD3P0C7P0 127 aa27.65■■■□□ 2.02
SSBP4-202ENST00000348495 NRLP54845 237 aa27.65■■■□□ 2.02
SSBP4-202ENST00000348495 APCDD1Q8J025 514 aa27.65■■■□□ 2.02
SSBP4-202ENST00000348495 NAT16Q8N8M0 369 aa27.65■■■□□ 2.02
SSBP4-202ENST00000348495 XPO6Q96QU8 1125 aaKnown RBP27.65■■■□□ 2.02
SSBP4-202ENST00000348495 UNC80Q8N2C7 3258 aa27.65■■■□□ 2.02
SSBP4-202ENST00000348495 SHROOM3Q8TF72 1996 aa27.65■■■□□ 2.02
SSBP4-202ENST00000348495 ZMPSTE24O75844 475 aa27.64■■■□□ 2.02
SSBP4-202ENST00000348495 NR1H3Q13133 447 aa27.64■■■□□ 2.02
SSBP4-202ENST00000348495 PLEKHG6Q3KR16 790 aa27.64■■■□□ 2.02
SSBP4-202ENST00000348495 PRUNE1Q86TP1 453 aa27.64■■■□□ 2.02
SSBP4-202ENST00000348495 DCAF4L2Q8NA75 395 aa27.64■■■□□ 2.02
SSBP4-202ENST00000348495 TRIM51Q9BSJ1 452 aa27.64■■■□□ 2.02
SSBP4-202ENST00000348495 BRD9Q9H8M2 597 aa27.64■■■□□ 2.02
SSBP4-202ENST00000348495 VPS28Q9UK41 221 aa27.64■■■□□ 2.02
SSBP4-202ENST00000348495 C5orf60A6NFR6 353 aa27.64■■■□□ 2.01
SSBP4-202ENST00000348495 ETS1P14921 441 aa27.64■■■□□ 2.01
SSBP4-202ENST00000348495 GLDCP23378 1020 aa27.64■■■□□ 2.01
SSBP4-202ENST00000348495 PTPN3P26045 913 aa27.64■■■□□ 2.01
SSBP4-202ENST00000348495 IFI35P80217 286 aaPredicted RBP27.64■■■□□ 2.01
SSBP4-202ENST00000348495 PTK6Q13882 451 aa27.64■■■□□ 2.01
SSBP4-202ENST00000348495 ITPRIPL2Q3MIP1 535 aa27.64■■■□□ 2.01
SSBP4-202ENST00000348495 ZNF354CQ86Y25 554 aa27.64■■■□□ 2.01
SSBP4-202ENST00000348495 SLC44A3Q8N4M1 653 aa27.64■■■□□ 2.01
SSBP4-202ENST00000348495 CHFRQ96EP1 664 aa27.64■■■□□ 2.01
SSBP4-202ENST00000348495 ZNF419Q96HQ0 510 aaPredicted RBP27.64■■■□□ 2.01
SSBP4-202ENST00000348495 SP110Q9HB58 689 aa27.64■■■□□ 2.01
SSBP4-202ENST00000348495 PCDH9Q9HC56 1237 aa27.64■■■□□ 2.01
SSBP4-202ENST00000348495 DNAJC17Q9NVM6 304 aaKnown RBP27.64■■■□□ 2.01
SSBP4-202ENST00000348495 GGA2Q9UJY4 613 aa27.64■■■□□ 2.01
SSBP4-202ENST00000348495 SLC27A6Q9Y2P4 619 aa27.64■■■□□ 2.01
SSBP4-202ENST00000348495 LOC730098B7Z3J9 87 aa27.63■■■□□ 2.01
SSBP4-202ENST00000348495 RNF103O00237 685 aa27.63■■■□□ 2.01
SSBP4-202ENST00000348495 TULP3O75386 442 aa27.63■■■□□ 2.01
SSBP4-202ENST00000348495 GCATO75600 419 aa27.63■■■□□ 2.01
SSBP4-202ENST00000348495 IFNB1P01574 187 aa27.63■■■□□ 2.01
SSBP4-202ENST00000348495 KRT14P02533 472 aa27.63■■■□□ 2.01
SSBP4-202ENST00000348495 PABPC1P11940 636 aaKnown RBP27.63■■■□□ 2.01
SSBP4-202ENST00000348495 GJA4P35212 333 aa27.63■■■□□ 2.01
SSBP4-202ENST00000348495 NUMBP49757 651 aa27.63■■■□□ 2.01
SSBP4-202ENST00000348495 SLC7A5Q01650 507 aa27.63■■■□□ 2.01
SSBP4-202ENST00000348495 ZBTB17Q13105 803 aa27.63■■■□□ 2.01
SSBP4-202ENST00000348495 PPP1R7Q15435 360 aa27.63■■■□□ 2.01
SSBP4-202ENST00000348495 P3H1Q32P28 736 aa27.63■■■□□ 2.01
SSBP4-202ENST00000348495 PITRM1Q5JRX3 1037 aa27.63■■■□□ 2.01
SSBP4-202ENST00000348495 CCDC89Q8N998 374 aa27.63■■■□□ 2.01
SSBP4-202ENST00000348495 ZNF599Q96NL3 588 aa27.63■■■□□ 2.01
SSBP4-202ENST00000348495 FERMT1Q9BQL6 677 aa27.63■■■□□ 2.01
SSBP4-202ENST00000348495 DMGDHQ9UI17 866 aaKnown RBP27.63■■■□□ 2.01
SSBP4-202ENST00000348495 BHMG1C9JSJ3 638 aaPredicted RBP27.62■■■□□ 2.01
SSBP4-202ENST00000348495 TRIM24O15164 1050 aa27.62■■■□□ 2.01
SSBP4-202ENST00000348495 SNAP91O60641 907 aa27.62■■■□□ 2.01
SSBP4-202ENST00000348495 ZSCAN5DPP0CG00 497 aa27.62■■■□□ 2.01
SSBP4-202ENST00000348495 CCNB1P14635 433 aa27.62■■■□□ 2.01
SSBP4-202ENST00000348495 ARF5P84085 180 aa27.62■■■□□ 2.01
SSBP4-202ENST00000348495 HNRNPDQ14103 355 aaKnown RBP27.62■■■□□ 2.01
SSBP4-202ENST00000348495 FUT11Q495W5 492 aa27.62■■■□□ 2.01
SSBP4-202ENST00000348495 FAM182AQ5T1J6 154 aa27.62■■■□□ 2.01
SSBP4-202ENST00000348495 UBXN4Q92575 508 aa27.62■■■□□ 2.01
SSBP4-202ENST00000348495 IL12RB2Q99665 862 aa27.62■■■□□ 2.01
SSBP4-202ENST00000348495 TRPV5Q9NQA5 729 aa27.62■■■□□ 2.01
SSBP4-202ENST00000348495 VPS51Q9UID3 782 aa27.62■■■□□ 2.01
SSBP4-202ENST00000348495 HPCAL4Q9UM19 191 aa27.62■■■□□ 2.01
SSBP4-202ENST00000348495 KIAA1549LQ6ZVL6 1849 aa27.62■■■□□ 2.01
SSBP4-202ENST00000348495 A0A0A0MRY4 1105 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 CBX4O00257 560 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 RHOXF2BP0C7M4 288 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 DGKGP49619 791 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 DMC1Q14565 340 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 TRIP13Q15645 432 aaPredicted RBP27.61■■■□□ 2.01
SSBP4-202ENST00000348495 TEX44Q53QW1 395 aa27.61■■■□□ 2.01
SSBP4-202ENST00000348495 CCDC70Q6NSX1 233 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms