RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 LRRC39Q96DD0 335 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 IFT43Q96FT9 208 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 RSRC1Q96IZ7 334 aaKnown RBP6.17□□□□□ -1.42
CLCN3-201ENST00000347613 HSFY1Q96LI6 401 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 TTC1Q99614 292 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 APBA2Q99767 749 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 IQCGQ9H095 443 aaKnown RBP6.17□□□□□ -1.42
CLCN3-201ENST00000347613 TKTL2Q9H0I9 626 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 IARS2Q9NSE4 1012 aaKnown RBP6.17□□□□□ -1.42
CLCN3-201ENST00000347613 ZDHHC2Q9UIJ5 367 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 FBXW11Q9UKB1 542 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 ZNF487B1APH4 448 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 H3BNX3 289 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 RNASEH1O60930 286 aaKnown RBP6.17□□□□□ -1.42
CLCN3-201ENST00000347613 PGK1P00558 417 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 POMCP01189 267 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 JCHAINP01591 159 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 C2P06681 752 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 SERPINA6P08185 405 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 ANPEPP15144 967 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 BDNFP23560 247 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 GRIA2P42262 883 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 GPR15P49685 360 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 PSEN2P49810 448 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 VASPP50552 380 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-201ENST00000347613 GDF6Q6KF10 455 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-201ENST00000347613 ANKRD23Q86SG2 305 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 TAC4Q86UU9 113 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 ZDHHC17Q8IUH5 632 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 ARHGAP12Q8IWW6 846 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 RNF148Q8N7C7 305 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 HMGCLL1Q8TB92 370 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 CCDC124Q96CT7 223 aaKnown RBP6.17□□□□□ -1.42
CLCN3-201ENST00000347613 ZIC5Q96T25 663 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 RBBP8Q99708 897 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 COLEC11Q9BWP8 271 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 TSPYL2Q9H2G4 693 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-201ENST00000347613 CASS4Q9NQ75 786 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 DDIT4Q9NX09 232 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 DONSONQ9NYP3 566 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 KLHL42Q9P2K6 505 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 STX18Q9P2W9 335 aaKnown RBP6.17□□□□□ -1.42
CLCN3-201ENST00000347613 TAGLN3Q9UI15 199 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 ACTL7AQ9Y615 435 aa6.17□□□□□ -1.42
CLCN3-201ENST00000347613 ARL5CA6NH57 179 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 ENO4A6NNW6 628 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 TARM1B6A8C7 271 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 NVLO15381 856 aaKnown RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 GRID2O43424 1007 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 HUS1O60921 280 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 AP1G2O75843 785 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 PARNO95453 639 aaKnown RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 UBTFL6P0CB48 400 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 ZCCHC18P0CG32 403 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 AOC1P19801 751 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 EPHA3P29320 983 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 TYK2P29597 1187 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 KCNC1P48547 511 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 ACTR3P61158 418 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 IFRD2Q12894 506 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 PTPRCAPQ14761 206 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 TWF2Q6IBS0 349 aaKnown RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 ESRP1Q6NXG1 681 aaKnown RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 PGM2L1Q6PCE3 622 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 USP50Q70EL3 339 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 CYS1Q717R9 158 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 GET4Q7L5D6 327 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 LDB1Q86U70 411 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 FAM35AQ86V20 835 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 TMPRSS6Q8IU80 811 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 CRLF3Q8IUI8 442 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 GPR152Q8TDT2 470 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 GATA6Q92908 595 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 NSMCE3Q96MG7 304 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 GPR78Q96P69 363 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 MPHOSPH6Q99547 160 aaKnown RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 MED10Q9BTT4 135 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 GATA5Q9BWX5 397 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 ARHGAP39Q9C0H5 1083 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 YIPF3Q9GZM5 350 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 OSBPL2Q9H1P3 480 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 EBF3Q9H4W6 596 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 ZFATQ9P243 1243 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 IGSF9Q9P2J2 1179 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 OR12D3Q9UGF7 316 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 VANGL2Q9ULK5 521 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 ST3GAL5Q9UNP4 418 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 TDRD15B5MCY1 1934 aaKnown RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 A0A096LPK6 155 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 MYOCOSA0A1B0GUC4 107 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 NEMP1O14524 444 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 BIRC5O15392 142 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 AP2A1O95782 977 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 IGHA2P01877 340 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 SLC35E2BP0CK96 405 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 RALBP11234 206 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 SP100P23497 879 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-201ENST00000347613 GCKP35557 465 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 ARL4AP40617 200 aa6.16□□□□□ -1.42
CLCN3-201ENST00000347613 PEX19P40855 299 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms