RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 RALBP11234 206 aa19.73■□□□□ 0.75
COL9A3-201ENST00000343916 SLC5A3P53794 718 aa19.73■□□□□ 0.75
COL9A3-201ENST00000343916 SESN3P58005 492 aa19.73■□□□□ 0.75
COL9A3-201ENST00000343916 MPP3Q13368 585 aa19.73■□□□□ 0.75
COL9A3-201ENST00000343916 LPIN1Q14693 890 aa19.73■□□□□ 0.75
COL9A3-201ENST00000343916 TAF11Q15544 211 aa19.73■□□□□ 0.75
COL9A3-201ENST00000343916 INSCQ1MX18 579 aa19.73■□□□□ 0.75
COL9A3-201ENST00000343916 VWA5B1Q5TIE3 1220 aa19.73■□□□□ 0.75
COL9A3-201ENST00000343916 ENDOVQ8N8Q3 282 aaKnown RBP19.73■□□□□ 0.75
COL9A3-201ENST00000343916 VAT1Q99536 393 aa19.73■□□□□ 0.75
COL9A3-201ENST00000343916 SERPINA6P08185 405 aa19.73■□□□□ 0.75
COL9A3-201ENST00000343916 CPA3P15088 417 aa19.73■□□□□ 0.75
COL9A3-201ENST00000343916 SAT1P21673 171 aa19.73■□□□□ 0.75
COL9A3-201ENST00000343916 SERPINB8P50452 374 aa19.73■□□□□ 0.75
COL9A3-201ENST00000343916 ERFP50548 548 aa19.73■□□□□ 0.75
COL9A3-201ENST00000343916 TUBB3Q13509 450 aa19.73■□□□□ 0.75
COL9A3-201ENST00000343916 SAPCD2Q86UD0 394 aa19.73■□□□□ 0.75
COL9A3-201ENST00000343916 MOCOSQ96EN8 888 aa19.73■□□□□ 0.75
COL9A3-201ENST00000343916 IL22Q9GZX6 179 aa19.73■□□□□ 0.75
COL9A3-201ENST00000343916 CCDC189A1A4V9 331 aa19.72■□□□□ 0.75
COL9A3-201ENST00000343916 M0QZQ0 153 aa19.72■□□□□ 0.75
COL9A3-201ENST00000343916 IRAK2O43187 625 aa19.72■□□□□ 0.75
COL9A3-201ENST00000343916 PAGE1O75459 146 aa19.72■□□□□ 0.75
COL9A3-201ENST00000343916 IGLV3-25P01717 112 aa19.72■□□□□ 0.75
COL9A3-201ENST00000343916 PGM1P36871 562 aa19.72■□□□□ 0.75
COL9A3-201ENST00000343916 GRIK1P39086 918 aa19.72■□□□□ 0.75
COL9A3-201ENST00000343916 MAGEA12P43365 314 aa19.72■□□□□ 0.75
COL9A3-201ENST00000343916 PTDSS1P48651 473 aaKnown RBP19.72■□□□□ 0.75
COL9A3-201ENST00000343916 CDH17Q12864 832 aa19.72■□□□□ 0.75
COL9A3-201ENST00000343916 TUSC3Q13454 348 aa19.72■□□□□ 0.75
COL9A3-201ENST00000343916 KCNA10Q16322 511 aa19.72■□□□□ 0.75
COL9A3-201ENST00000343916 TRIM68Q6AZZ1 485 aa19.72■□□□□ 0.75
COL9A3-201ENST00000343916 RGMBQ6NW40 437 aa19.72■□□□□ 0.75
COL9A3-201ENST00000343916 CASP10Q92851 521 aa19.72■□□□□ 0.75
COL9A3-201ENST00000343916 CLPTM1LQ96KA5 538 aa19.72■□□□□ 0.75
COL9A3-201ENST00000343916 ACSS2Q9NR19 701 aa19.72■□□□□ 0.75
COL9A3-201ENST00000343916 TRMT13Q9NUP7 481 aaKnown RBP19.72■□□□□ 0.75
COL9A3-201ENST00000343916 B4GALT3O60512 393 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 KRT36O76013 467 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 MOCS2O96007 188 aaPredicted RBP19.71■□□□□ 0.75
COL9A3-201ENST00000343916 ABL2P42684 1182 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 FLT3LGP49771 235 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 CDK18Q07002 472 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 GRIK3Q13003 919 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 DBN1Q16643 649 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 MFSD14CQ5VZR4 134 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 ARHGAP12Q8IWW6 846 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 URGCPQ8TCY9 931 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 ISL2Q96A47 359 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 VPS39Q96JC1 886 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 ZIC5Q96T25 663 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 DCLRE1BQ9H816 532 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 CPSF2Q9P2I0 782 aaKnown RBP19.71■□□□□ 0.75
COL9A3-201ENST00000343916 TAGLN3Q9UI15 199 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 SOX13Q9UN79 622 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 RPL26L1Q9UNX3 145 aaKnown RBP19.71■□□□□ 0.75
COL9A3-201ENST00000343916 ADAMTS4O75173 837 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 SMNDC1O75940 238 aaKnown RBP eCLIP19.71■□□□□ 0.751e-6■■■□□ 15.1
COL9A3-201ENST00000343916 C2P06681 752 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 NPY2RP49146 381 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 CCNG1P51959 295 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 EIF4EBP2Q13542 120 aaPredicted RBP19.71■□□□□ 0.75
COL9A3-201ENST00000343916 DSC3Q14574 896 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 BTBD8Q5XKL5 378 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 NAPEPLDQ6IQ20 393 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 NAPRTQ6XQN6 538 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 KDELC2Q7Z4H8 507 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 ATPAF2Q8N5M1 289 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 IPMKQ8NFU5 416 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 PPP4R1Q8TF05 950 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 FAM161BQ96MY7 647 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 OSBPL2Q9H1P3 480 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 ARHGEF38Q9NXL2 777 aa19.71■□□□□ 0.75
COL9A3-201ENST00000343916 MEI4A8MW99 385 aa19.7■□□□□ 0.74
COL9A3-201ENST00000343916 CHRM1P11229 460 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-201ENST00000343916 RAB27AP51159 221 aa19.7■□□□□ 0.74
COL9A3-201ENST00000343916 ABCE1P61221 599 aaKnown RBP19.7■□□□□ 0.74
COL9A3-201ENST00000343916 PRPSAP1Q14558 356 aa19.7■□□□□ 0.74
COL9A3-201ENST00000343916 POU6F1Q14863 301 aa19.7■□□□□ 0.74
COL9A3-201ENST00000343916 RCN1Q15293 331 aa19.7■□□□□ 0.74
COL9A3-201ENST00000343916 SDHAF4Q5VUM1 108 aa19.7■□□□□ 0.74
COL9A3-201ENST00000343916 TMPRSS6Q8IU80 811 aa19.7■□□□□ 0.74
COL9A3-201ENST00000343916 AGR3Q8TD06 166 aa19.7■□□□□ 0.74
COL9A3-201ENST00000343916 FCRL2Q96LA5 508 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-201ENST00000343916 SLC39A8Q9C0K1 460 aa19.7■□□□□ 0.74
COL9A3-201ENST00000343916 MPP6Q9NZW5 540 aa19.7■□□□□ 0.74
COL9A3-201ENST00000343916 ADAM28Q9UKQ2 775 aa19.7■□□□□ 0.74
COL9A3-201ENST00000343916 SLC39A10Q9ULF5 831 aa19.7■□□□□ 0.74
COL9A3-201ENST00000343916 SEPT4O43236 478 aa19.7■□□□□ 0.74
COL9A3-201ENST00000343916 CCNHP51946 323 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-201ENST00000343916 ZNF135P52742 658 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-201ENST00000343916 TSPY1Q01534 308 aa19.7■□□□□ 0.74
COL9A3-201ENST00000343916 USP4Q13107 963 aa19.7■□□□□ 0.74
COL9A3-201ENST00000343916 CCDC153Q494R4 210 aa19.7■□□□□ 0.74
COL9A3-201ENST00000343916 SPATA2LQ8IUW3 424 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-201ENST00000343916 DTX3LQ8TDB6 740 aa19.7■□□□□ 0.74
COL9A3-201ENST00000343916 UPF3AQ9H1J1 476 aaKnown RBP19.7■□□□□ 0.74
COL9A3-201ENST00000343916 NMUR1Q9HB89 426 aa19.7■□□□□ 0.74
COL9A3-201ENST00000343916 APOBEC2Q9Y235 224 aaKnown RBP19.7■□□□□ 0.74
COL9A3-201ENST00000343916 MAGEB16A2A368 324 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms