RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 SEC31BQ9NQW1 1179 aa17.89■□□□□ 0.45
SMAD4-201ENST00000342988 RLN2P04090 185 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 ZNF234Q14588 700 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 DENND5BQ6ZUT9 1274 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 MTDHQ86UE4 582 aaKnown RBP17.88■□□□□ 0.45
SMAD4-201ENST00000342988 HIPK1Q86Z02 1210 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 CENPSQ8N2Z9 138 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 TCEAL3Q969E4 200 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 CYP4F12Q9HCS2 524 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 TNPO3Q9Y5L0 923 aaKnown RBP17.88■□□□□ 0.45
SMAD4-201ENST00000342988 SLC28A2O43868 658 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 CCNT2O60583 730 aaKnown RBP17.88■□□□□ 0.45
SMAD4-201ENST00000342988 LPCAT1Q8NF37 534 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 EDC3Q96F86 508 aaKnown RBP17.88■□□□□ 0.45
SMAD4-201ENST00000342988 MGME1Q9BQP7 344 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 TTYH1Q9H313 450 aaPredicted RBP17.88■□□□□ 0.45
SMAD4-201ENST00000342988 DBNDD1Q9H9R9 158 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 ZNF639Q9UID6 485 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 C2orf71A6NGG8 1288 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 XKRYO14609 159 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 WRNIP1Q96S55 665 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 ZNF350Q9GZX5 532 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 GCATO75600 419 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 EYA4O95677 639 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 CCNYL3P0C7X3 344 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 ETS1P14921 441 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 ME2P23368 584 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 IRAK1P51617 712 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 USP46P62068 366 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 ALG10Q5BKT4 473 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 LENG1Q96BZ8 264 aaPredicted RBP17.88■□□□□ 0.45
SMAD4-201ENST00000342988 COLEC11Q9BWP8 271 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 PABPC3Q9H361 631 aaKnown RBP17.88■□□□□ 0.45
SMAD4-201ENST00000342988 B8ZZF3 427 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 PRKCEQ02156 737 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 DEF8Q6ZN54 512 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 TEFMQ96QE5 360 aaKnown RBP17.88■□□□□ 0.45
SMAD4-201ENST00000342988 ZNF221Q9UK13 617 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 MSH4O15457 936 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 PHKG2P15735 406 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 SETMARQ53H47 684 aaPredicted RBP17.88■□□□□ 0.45
SMAD4-201ENST00000342988 SRBD1Q8N5C6 995 aaKnown RBP17.88■□□□□ 0.45
SMAD4-201ENST00000342988 MAFIPQ8WZ33 124 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 GNEQ9Y223 722 aaKnown RBP17.88■□□□□ 0.45
SMAD4-201ENST00000342988 TOPBP1Q92547 1522 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 ADORA1P30542 326 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 ATP13A4Q4VNC1 1196 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 BTBD10Q9BSF8 475 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 PLGRKTQ9HBL7 147 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 USP18Q9UMW8 372 aa17.88■□□□□ 0.45
SMAD4-201ENST00000342988 ZBTB14O43829 449 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 RIPPLY1Q0D2K3 151 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 ADGRG2Q8IZP9 1017 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 ARMC10Q8N2F6 343 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 RNF146Q9NTX7 359 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 ZNF185O15231 689 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 S100A3P33764 101 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 CYP2A13Q16696 494 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 DNAJC10Q8IXB1 793 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 OFCC1Q8IZS5 231 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 AIFM3Q96NN9 605 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 MTMR12Q9C0I1 747 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 DHX15O43143 795 aaKnown RBP17.87■□□□□ 0.45
SMAD4-201ENST00000342988 MPP3Q13368 585 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 Q4G0T1 1027 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 AADACL4Q5VUY2 407 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 C17orf50Q8WW18 174 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 FBXO32Q969P5 355 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 ERI2A8K979 691 aaKnown RBP17.87■□□□□ 0.45
SMAD4-201ENST00000342988 HOXA2O43364 376 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 GLRBP48167 497 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 KCTD21Q4G0X4 260 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 GPAT3Q53EU6 434 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 CPNE1Q99829 537 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 STAP2Q9UGK3 403 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 TPD52L2O43399 206 aaKnown RBP17.87■□□□□ 0.45
SMAD4-201ENST00000342988 EPHB3P54753 998 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 ENPEPQ07075 957 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 CBX3Q13185 183 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 CARNMT1Q8N4J0 409 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 VPS4AQ9UN37 437 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 FAM86C2PA6NEL3 165 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 ZNF7P17097 686 aaPredicted RBP17.87■□□□□ 0.45
SMAD4-201ENST00000342988 SENP6Q9GZR1 1112 aaPredicted RBP17.87■□□□□ 0.45
SMAD4-201ENST00000342988 RSPH9Q9H1X1 276 aaPredicted RBP17.87■□□□□ 0.45
SMAD4-201ENST00000342988 SERPINB7O75635 380 aa17.87■□□□□ 0.45
SMAD4-201ENST00000342988 ARSJQ5FYB0 599 aaPredicted RBP17.87■□□□□ 0.45
SMAD4-201ENST00000342988 TTC34A8MYJ7 566 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 CDK7P50613 346 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 GALNT7Q86SF2 657 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 ZNF471Q9BX82 626 aaPredicted RBP17.86■□□□□ 0.45
SMAD4-201ENST00000342988 SLC24A2Q9UI40 661 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 VPS28Q9UK41 221 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 GRK5P34947 590 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 PITPNAQ00169 270 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 OR8H3Q8N146 312 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 SYN2Q92777 582 aaPredicted RBP17.86■□□□□ 0.45
SMAD4-201ENST00000342988 ABCG2Q9UNQ0 655 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 KCNMA1Q12791 1236 aa17.86■□□□□ 0.45
SMAD4-201ENST00000342988 PKP1Q13835 747 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms