RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 HS1BP3Q53T59 392 aa13.42□□□□□ -0.26
NECTIN1-203ENST00000341398 CXorf57Q6NSI4 855 aaKnown RBP13.42□□□□□ -0.26
NECTIN1-203ENST00000341398 LRRC31Q6UY01 552 aa13.42□□□□□ -0.26
NECTIN1-203ENST00000341398 FAM183BPQ6ZVS7 135 aa13.42□□□□□ -0.26
NECTIN1-203ENST00000341398 PDZD3Q86UT5 571 aa13.42□□□□□ -0.26
NECTIN1-203ENST00000341398 TRIM69Q86WT6 500 aa13.42□□□□□ -0.26
NECTIN1-203ENST00000341398 PASD1Q8IV76 773 aa13.42□□□□□ -0.26
NECTIN1-203ENST00000341398 PIP4K2CQ8TBX8 421 aa13.42□□□□□ -0.26
NECTIN1-203ENST00000341398 C2orf49Q9BVC5 232 aaPredicted RBP13.42□□□□□ -0.26
NECTIN1-203ENST00000341398 DYRK4Q9NR20 520 aa13.42□□□□□ -0.26
NECTIN1-203ENST00000341398 PPM1HQ9ULR3 514 aa13.42□□□□□ -0.26
NECTIN1-203ENST00000341398 STAP1Q9ULZ2 295 aa13.42□□□□□ -0.26
NECTIN1-203ENST00000341398 ITPR1Q14643 2758 aa13.42□□□□□ -0.26
NECTIN1-203ENST00000341398 TDRD6O60522 2096 aaKnown RBP13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 APC2O95996 2303 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 BNIP3LO60238 219 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 GADD45BO75293 160 aaPredicted RBP13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 RTN2O75298 545 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 PAGE1O75459 146 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 DAB1O75553 588 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 VAV1P15498 845 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 PON1P27169 355 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 EPHA8P29322 1005 aaPredicted RBP13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 MAT2AP31153 395 aaKnown RBP13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 NUMBP49757 651 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 CNTN1Q12860 1018 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 ILKQ13418 452 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 CAMK2BQ13554 666 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 BRMS1LQ5PSV4 323 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 NEK5Q6P3R8 708 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 SLC26A9Q7LBE3 791 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 FAM114A1Q8IWE2 563 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 SH2D3CQ8N5H7 860 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 MLKLQ8NB16 471 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 ATP11CQ8NB49 1132 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 ZNF397Q8NF99 534 aaPredicted RBP13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 FAM131CQ96AQ9 280 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 NXPE2Q96DL1 559 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 ALG14Q96F25 216 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 KLHDC7BQ96G42 594 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 PREBQ9HCU5 417 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.41□□□□□ -0.261e-7■■■■■ 52.3
NECTIN1-203ENST00000341398 DNAJC12Q9UKB3 198 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 TBC1D30Q9Y2I9 924 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 GTF3C3Q9Y5Q9 886 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 HS3ST4Q9Y661 456 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 MYLKQ15746 1914 aa13.41□□□□□ -0.26
NECTIN1-203ENST00000341398 EIF4E1BA6NMX2 242 aaKnown RBP13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 C10orf142B7Z368 130 aa13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 WNT9AO14904 365 aa13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 RHOCP08134 193 aa13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 CKMT2P17540 419 aa13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 RECQLP46063 649 aaPredicted RBP13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 RNASE9P60153 205 aaKnown RBP13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 PPP2CBP62714 309 aa13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 PPP2CAP67775 309 aa13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 CENPCQ03188 943 aa13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 BNIP3Q12983 259 aa13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 SHBQ15464 509 aa13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 CAMK4Q16566 473 aa13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 C5orf22Q49AR2 442 aa13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 OLFML1Q6UWY5 402 aa13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 Q6ZVU0 165 aa13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 SETD3Q86TU7 594 aaPredicted RBP13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 TMEM35BQ8NCS4 154 aa13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 MSANTD4Q8NCY6 345 aa13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 TKTL2Q9H0I9 626 aa13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 ARHGAP20Q9P2F6 1191 aa13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 SARDHQ9UL12 918 aa13.4□□□□□ -0.26
NECTIN1-203ENST00000341398 ARID1BQ8NFD5 2236 aaPredicted RBP13.4□□□□□ -0.27
NECTIN1-203ENST00000341398 SHROOM3Q8TF72 1996 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 FOXN3O00409 490 aaPredicted RBP13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 PLK4O00444 970 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 PRNPP04156 253 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 ERBB2P04626 1255 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 UBE2HP62256 183 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 DEUP1Q05D60 604 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 DNAJC3Q13217 504 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 MAN2A1Q16706 1144 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 AGBL4Q5VU57 503 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 LRRC69Q6ZNQ3 347 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 MARCH9Q86YJ5 346 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 TMIEQ8NEW7 156 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 C18orf8Q96DM3 657 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 LRIG1Q96JA1 1093 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 C1orf74Q96LT6 269 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 HS3ST2Q9Y278 367 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 OR51B4Q9Y5P0 310 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 AK5Q9Y6K8 562 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 TRPM6Q9BX84 2022 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 DOCK4Q8N1I0 1966 aa13.39□□□□□ -0.27
NECTIN1-203ENST00000341398 SMG1Q96Q15 3661 aaKnown RBP13.38□□□□□ -0.27
NECTIN1-203ENST00000341398 A0A087WV48 116 aa13.38□□□□□ -0.27
NECTIN1-203ENST00000341398 KPNA3O00505 521 aaPredicted RBP13.38□□□□□ -0.27
NECTIN1-203ENST00000341398 SRCP12931 536 aa13.38□□□□□ -0.27
NECTIN1-203ENST00000341398 CHRNA3P32297 505 aa13.38□□□□□ -0.27
NECTIN1-203ENST00000341398 CLCN1P35523 988 aa13.38□□□□□ -0.27
NECTIN1-203ENST00000341398 SCNN1AP37088 669 aa13.38□□□□□ -0.27
NECTIN1-203ENST00000341398 CXCR3P49682 368 aa13.38□□□□□ -0.27
NECTIN1-203ENST00000341398 ACADVLP49748 655 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms