RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 BCL7CQ8WUZ0 217 aaPredicted RBP10.37□□□□□ -0.75
RBFOX1-202ENST00000340209 E2F7Q96AV8 911 aa10.37□□□□□ -0.75
RBFOX1-202ENST00000340209 PRR11Q96HE9 360 aaPredicted RBP10.37□□□□□ -0.75
RBFOX1-202ENST00000340209 TTPALQ9BTX7 342 aa10.37□□□□□ -0.75
RBFOX1-202ENST00000340209 LRRC40Q9H9A6 602 aa10.37□□□□□ -0.75
RBFOX1-202ENST00000340209 VGLL3A8MV65 326 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 CBX4O00257 560 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 GJB5O95377 273 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 GJA1P17302 382 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 TPSB2P20231 275 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 SERPINB3P29508 390 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 ELF1P32519 619 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 SESN3P58005 492 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 MGAT5Q09328 741 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 SLC10A7Q0GE19 358 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 GALNT3Q14435 633 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 TPSAB1Q15661 275 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 CFAP157Q5JU67 520 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 ESRP1Q6NXG1 681 aaKnown RBP10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 LRRC8BQ6P9F7 803 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 PIGWQ7Z7B1 504 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 ACVR1CQ8NER5 493 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 OR7D4Q8NG98 312 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 TMEM169Q96HH4 297 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 TMEM120AQ9BXJ8 343 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 PLAC1Q9HBJ0 212 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 CD248Q9HCU0 757 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 EURLQ9NYK6 297 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 OR51F1A6NGY5 319 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 EIF4E1BA6NMX2 242 aaKnown RBP10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 SMAPO00193 183 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 EOMESO95936 686 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 SCNN1AP37088 669 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 APLP1P51693 650 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 SLC12A2P55011 1212 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 KDSRQ06136 332 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 IRF5Q13568 498 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 ITGA9Q13797 1035 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 PAFAH1B3Q15102 231 aaKnown RBP10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 ZNF470Q6ECI4 717 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 LINGO4Q6UY18 593 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 ALYREFQ86V81 257 aaKnown RBP10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 MON1AQ86VX9 555 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 OR6K2Q8NGY2 324 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 ZSCAN18Q8TBC5 510 aaPredicted RBP10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 IGSF8Q969P0 613 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 TASP1Q9H6P5 420 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 TLR8Q9NR97 1041 aaKnown RBP10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 MTO1Q9Y2Z2 717 aaKnown RBP10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 EDF1O60869 148 aaKnown RBP10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 PPIDQ08752 370 aaKnown RBP10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 MPP3Q13368 585 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 BTG3Q14201 252 aaPredicted RBP10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 FASTKD1Q53R41 847 aaKnown RBP10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 LIMS2Q7Z4I7 341 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 TDRPQ86YL5 185 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 SLC41A1Q8IVJ1 513 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 FBXO22Q8NEZ5 403 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 NT5C3BQ969T7 300 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 NTAN1Q96AB6 310 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 SMIM14Q96QK8 99 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 TBL1YQ9BQ87 522 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 FBXO44Q9H4M3 255 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 CYP4F12Q9HCS2 524 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 TLK1Q9UKI8 766 aa10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.36□□□□□ -0.75
RBFOX1-202ENST00000340209 A8MX80 341 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 KCNU1A8MYU2 1149 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 PRPF4O43172 522 aaKnown RBP eCLIP10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 DIAPH2O60879 1101 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 AP2A1O95782 977 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 GALTP07902 379 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 CCL5P13501 91 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 GLUD2P49448 558 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 PLK1P53350 603 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 ANKRD20A4Q4UJ75 823 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 FBXL22Q6P050 247 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 MCUQ8NE86 351 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 RMDN1Q96DB5 314 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 MYEOVQ96EZ4 313 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 ELMO2Q96JJ3 720 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 TSPAN18Q96SJ8 248 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 OMDQ99983 421 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 ZBED2Q9BTP6 218 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 GBA3Q9H227 469 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 RCOR3Q9P2K3 495 aaPredicted RBP10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 GOLGA4Q13439 2230 aaKnown RBP10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 RAMP2O60895 175 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 ENO1P06733 434 aaKnown RBP10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 TYMPP19971 482 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 CST5P28325 142 aaPredicted RBP10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 ARL1P40616 181 aaPredicted RBP10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 SCNN1BP51168 640 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 AQP5P55064 265 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 POLD3Q15054 466 aaPredicted RBP10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 NAPEPLDQ6IQ20 393 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 C6orf89Q6UWU4 347 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 NPAS4Q8IUM7 802 aa10.35□□□□□ -0.75
RBFOX1-202ENST00000340209 KCNV2Q8TDN2 545 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms