RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 FAM71AQ8IYT1 594 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 NAT8LQ8N9F0 302 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 HPS1Q92902 700 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 KAT5Q92993 513 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 TTC17Q96AE7 1141 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 MRRFQ96E11 262 aaKnown RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 SORT1Q99523 831 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 MMP19Q99542 508 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 HAUS8Q9BT25 410 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 COPS7BQ9H9Q2 264 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 DNPEPQ9ULA0 475 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 PNMA6FA0A0J9YX94 578 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 ARHGAP42A6NI28 874 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 XPO1O14980 1071 aaKnown RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 CLIC2O15247 247 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 CLASP2O75122 1294 aaKnown RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 HSPA13P48723 471 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 COPAP53621 1224 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 IRX4P78413 519 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 HTRA4P83105 476 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 RAB39AQ14964 217 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 AMHR2Q16671 573 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 DGKDQ16760 1214 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 EPC2Q52LR7 807 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 PRR16Q569H4 304 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 PPP6R3Q5H9R7 873 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 KRT79Q5XKE5 535 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 PLA2G4FQ68DD2 849 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 HMBOX1Q6NT76 420 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 ARMCX2Q7L311 632 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 GPBP1Q86WP2 473 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 WDR75Q8IWA0 830 aaKnown RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 EXOC8Q8IYI6 725 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 SLC44A1Q8WWI5 657 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 TFAP2CQ92754 450 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 ACAP3Q96P50 834 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 NACC1Q96RE7 527 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 UHRF1Q96T88 793 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 GPR20Q99678 358 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 CCDC68Q9H2F9 335 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 PDZD7Q9H5P4 517 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 AKIP1Q9NQ31 210 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 OLFML3Q9NRN5 406 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 BMP2KQ9NSY1 1161 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 SCN1AP35498 2009 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 TCRBV7S3A2A0A539 114 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 CHEK2O96017 543 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 MYCLP12524 364 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 ZNF182P17025 639 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 PSMC3P17980 439 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 XRCC1P18887 633 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 POLR2IP36954 125 aaKnown RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 HPCAL1P37235 193 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 TAS2R40P59535 323 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 DLG4P78352 724 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 CRY1Q16526 586 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 SLC47A2Q86VL8 602 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 ZC3H7AQ8IWR0 971 aaKnown RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 PPTC7Q8NI37 304 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 CYP2W1Q8TAV3 490 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 RAB3IL1Q8TBN0 382 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 CHAC2Q8WUX2 184 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 NLRP7Q8WX94 980 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 CNDP2Q96KP4 475 aaKnown RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 LRGUKQ96M69 825 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 PDCD2LQ9BRP1 358 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 TEX13BQ9BXU2 312 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 SLC7A5P2Q9GIP4 190 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 TP63Q9H3D4 680 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 MARCOQ9UEW3 520 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 ABT1Q9ULW3 272 aaKnown RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 SLC8A2Q9UPR5 921 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 TMA7Q9Y2S6 64 aaKnown RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 DOCK8Q8NF50 2099 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 AXIN1O15169 862 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 ZC3H11AO75152 810 aaKnown RBP eCLIP5.7□□□□□ -1.55e-6■□□□□ 9.7
CSDE1-202ENST00000339438 DUSP11O75319 330 aaKnown RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 UGT2B4P06133 528 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 ENO2P09104 434 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 GNAO1P09471 354 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 NAGAP17050 411 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 EIF2AK2P19525 551 aaKnown RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 MATN1P21941 496 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 JAK1P23458 1154 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 IDH3AP50213 366 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 THOP1P52888 689 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 PSMC1P62191 440 aaKnown RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 MRPS22P82650 360 aaKnown RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 CEACAM7Q14002 265 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 PPP2R5DQ14738 602 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 TMEM26Q6ZUK4 368 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 GOLM1Q8NBJ4 401 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 CPT1BQ92523 772 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 KREMEN1Q96MU8 473 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 NAP1L4Q99733 375 aaKnown RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 ACO2Q99798 780 aaKnown RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 SH2D3AQ9BRG2 576 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 BTBD2Q9BX70 525 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 AMNQ9BXJ7 453 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms