RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 ATAD1Q8NBU5 361 aa11.32□□□□□ -0.6
LRP1-202ENST00000338962 SPOCK2Q92563 424 aa11.32□□□□□ -0.6
LRP1-202ENST00000338962 TTC17Q96AE7 1141 aa11.32□□□□□ -0.6
LRP1-202ENST00000338962 TBC1D31Q96DN5 1066 aa11.32□□□□□ -0.6
LRP1-202ENST00000338962 ZNF576Q9H609 170 aa11.32□□□□□ -0.6
LRP1-202ENST00000338962 SYBUQ9NX95 663 aa11.32□□□□□ -0.6
LRP1-202ENST00000338962 KLHL14Q9P2G3 628 aa11.32□□□□□ -0.6
LRP1-202ENST00000338962 NEU3Q9UQ49 428 aa11.32□□□□□ -0.6
LRP1-202ENST00000338962 ARL2BPQ9Y2Y0 163 aa11.32□□□□□ -0.6
LRP1-202ENST00000338962 SOX1O00570 391 aaPredicted RBP11.31□□□□□ -0.6
LRP1-202ENST00000338962 UGT1A9O60656 530 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 USP12O75317 370 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 JCHAINP01591 159 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 POLBP06746 335 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 SLC2A3P11169 496 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 NFKB1P19838 968 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 SERPINB9P50453 376 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 SLC18A2Q05940 514 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 CAMK1Q14012 370 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 USP41Q3LFD5 358 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 FBXW10Q5XX13 1052 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 TAS1R1Q7RTX1 841 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 CCDC63Q8NA47 563 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 FBXO22Q8NEZ5 403 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 ARNTL2Q8WYA1 636 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 OXNAD1Q96HP4 312 aaPredicted RBP11.31□□□□□ -0.6
LRP1-202ENST00000338962 TEKT5Q96M29 485 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 VPS11Q9H270 941 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 UGT1A7Q9HAW7 530 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 UGT1A10Q9HAW8 530 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 UGT1A8Q9HAW9 530 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 SLCO1B3Q9NPD5 702 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 OSER1Q9NX31 292 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 SLC17A7Q9P2U7 560 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 VANGL2Q9ULK5 521 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 PHTF1Q9UMS5 762 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 TLR6Q9Y2C9 796 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 STARD13Q9Y3M8 1113 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 MYO16Q9Y6X6 1858 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 NUP205Q92621 2012 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 WDR91A4D1P6 747 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 LILRB3O75022 631 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 ALADP13716 330 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 CNTFP26441 200 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 HOXC13P31276 330 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 CD68P34810 354 aaPredicted RBP11.31□□□□□ -0.6
LRP1-202ENST00000338962 TUBP50607 506 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 USP46P62068 366 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 DSG1Q02413 1049 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 BMPR2Q13873 1038 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 PRPSAP1Q14558 356 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 MANEALQ5VSG8 457 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 SH2D5Q6ZV89 423 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 TTC9BQ8N6N2 239 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 GPATCH11Q8N954 259 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 OR52K1Q8NGK4 314 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 GPR152Q8TDT2 470 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 POF1BQ8WVV4 589 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 FAM111AQ96PZ2 611 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 SRPK1Q96SB4 655 aaKnown RBP11.31□□□□□ -0.6
LRP1-202ENST00000338962 GORASP1Q9BQQ3 440 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 HERC2P3Q9BVR0 1158 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 LMAN2LQ9H0V9 348 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 ALG13Q9NP73 1137 aaKnown RBP11.31□□□□□ -0.6
LRP1-202ENST00000338962 BFARQ9NZS9 450 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 GMIPQ9P107 970 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 IRAK3Q9Y616 596 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 RPS6KL1Q9Y6S9 549 aa11.31□□□□□ -0.6
LRP1-202ENST00000338962 EPOPA6NHQ4 379 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 KCNU1A8MYU2 1149 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 E9PAM4 449 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 GRM6O15303 877 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 CTSAP10619 480 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 CCNCP24863 283 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 YWHAQP27348 245 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 NEK3P51956 506 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 GPM6BQ13491 265 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 OLIG2Q13516 323 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 MGAT5BQ3V5L5 792 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 LACTB2Q53H82 288 aaPredicted RBP11.3□□□□□ -0.6
LRP1-202ENST00000338962 HABP4Q5JVS0 413 aaKnown RBP11.3□□□□□ -0.6
LRP1-202ENST00000338962 MROH9Q5TGP6 573 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 CGB2Q6NT52 195 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 MSANTD2Q6P1R3 559 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 MARK2Q7KZI7 788 aaKnown RBP11.3□□□□□ -0.6
LRP1-202ENST00000338962 UNC5BQ8IZJ1 945 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 SPPL2BQ8TCT7 592 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 ZNF75CPQ92670 426 aaPredicted RBP11.3□□□□□ -0.6
LRP1-202ENST00000338962 FBXO32Q969P5 355 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 TSGA13Q96PP4 275 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 SEPT5Q99719 369 aaPredicted RBP11.3□□□□□ -0.6
LRP1-202ENST00000338962 TTPALQ9BTX7 342 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 ZBP1Q9H171 429 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 TTYH1Q9H313 450 aaPredicted RBP11.3□□□□□ -0.6
LRP1-202ENST00000338962 C12orf65Q9H3J6 166 aaKnown RBP11.3□□□□□ -0.6
LRP1-202ENST00000338962 LRRC40Q9H9A6 602 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 ZFATQ9P243 1243 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 TXNDC16Q9P2K2 825 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 HS3ST4Q9Y661 456 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 CHD7Q9P2D1 2997 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms