RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 PIGBQ92521 554 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 FRMD6Q96NE9 622 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 MATN2O00339 956 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 ENDOD1O94919 500 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 RTN3O95197 1032 aaPredicted RBP9.95□□□□□ -0.82
COL4A6-201ENST00000334504 DHFRP00374 187 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 MYBL2P10244 700 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 HNMTP50135 292 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 AP1S2P56377 157 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 GMFBP60983 142 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 FAM187BQ17R55 369 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 EFCAB12Q6NXP0 572 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 FAM47BQ8NA70 645 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 ZNF518BQ9C0D4 1074 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 DNAJC18Q9H819 358 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 SLC38A7Q9NVC3 462 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 DDX3XO00571 662 aaKnown RBP eCLIP9.94□□□□□ -0.82
COL4A6-201ENST00000334504 C9P02748 559 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 ARF4P18085 180 aaPredicted RBP9.94□□□□□ -0.82
COL4A6-201ENST00000334504 OMPP47874 163 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 ITGA7Q13683 1181 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 AADACL2Q6P093 401 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 MCOLN2Q8IZK6 566 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 PJA1Q8NG27 643 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 MAGEC3Q8TD91 643 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 CDHR5Q9HBB8 845 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 SEMA4BQ9NPR2 832 aaPredicted RBP9.94□□□□□ -0.82
COL4A6-201ENST00000334504 MORF4L1Q9UBU8 362 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 SNX7Q9UNH6 387 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 TTLL13PA6NNM8 815 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 F5H5T6 163 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 TRDMT1O14717 391 aaKnown RBP9.94□□□□□ -0.82
COL4A6-201ENST00000334504 TP73O15350 636 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 COX7A2P14406 83 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 HPCAL1P37235 193 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 CRATP43155 626 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 TAF6P49848 677 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 OXCT1P55809 520 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 CRTC3Q6UUV7 619 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 SYT12Q8IV01 421 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 DEPDC4Q8N2C3 294 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 ETNPPLQ8TBG4 499 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 UGGT1Q9NYU2 1555 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 MED24O75448 989 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 CDH17Q12864 832 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 NAB1Q13506 487 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 RABL6Q3YEC7 729 aaPredicted RBP9.94□□□□□ -0.82
COL4A6-201ENST00000334504 C6orf52Q5T4I8 152 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 IQSEC1Q6DN90 963 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 ZNF470Q6ECI4 717 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 ZNF613Q6PF04 617 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 MTSS1LQ765P7 747 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 GSTCDQ8NEC7 633 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 ITFG2Q969R8 447 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 DMRTB1Q96MA1 342 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 CHST7Q9NS84 486 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 GGA3Q9NZ52 723 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 POLR1DQ9Y2S0 133 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 COQ6Q9Y2Z9 468 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 ARHGEF40Q8TER5 1519 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 ZMYM2Q9UBW7 1377 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 NEO1Q92859 1461 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 ASB14A6NK59 587 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 SERPINA6P08185 405 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 SLC2A3P11169 496 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 IL18Q14116 193 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 LIN52Q52LA3 116 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 TDRD10Q5VZ19 366 aaKnown RBP9.94□□□□□ -0.82
COL4A6-201ENST00000334504 SYTL5Q8TDW5 730 aaPredicted RBP9.94□□□□□ -0.82
COL4A6-201ENST00000334504 RCN3Q96D15 328 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 IL25Q9H293 177 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 SPON1Q9HCB6 807 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 ZFYVE28Q9HCC9 887 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 AP3M1Q9Y2T2 418 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 RRN3P2A6NIE6 340 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 PRRG1O14668 218 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 HLA-DQA2P01906 255 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 CCDC166P0CW27 439 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 GARTP22102 1010 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 CAPGP40121 348 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 SCNN1BP51168 640 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 PTPN5P54829 565 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 PRR5LQ6MZQ0 368 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 TUBA3EQ6PEY2 450 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 ZNF438Q7Z4V0 828 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 DSG4Q86SJ6 1040 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 OR8H3Q8N146 312 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 ZNF398Q8TD17 642 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 NSUN4Q96CB9 384 aaKnown RBP9.94□□□□□ -0.82
COL4A6-201ENST00000334504 FAM84BQ96KN1 310 aaPredicted RBP9.94□□□□□ -0.82
COL4A6-201ENST00000334504 CBWD1Q9BRT8 395 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 DSN1Q9H410 356 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 S100A14Q9HCY8 104 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 ABCB9Q9NP78 766 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 TDRKHQ9Y2W6 561 aaKnown RBP9.94□□□□□ -0.82
COL4A6-201ENST00000334504 CEP170Q5SW79 1584 aa9.94□□□□□ -0.82
COL4A6-201ENST00000334504 SH3BGRLO75368 114 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 ZNF806P0C7X5 589 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 ZSCAN5DPP0CG00 497 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 GPR15P49685 360 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms