RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 RAB12Q6IQ22 244 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 DAW1Q8N136 415 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 COPS9Q8WXC6 57 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 KCNB2Q92953 911 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 BPIFA2Q96DR5 249 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 SEC16BQ96JE7 1060 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 TSNAXQ99598 290 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 CBWD1Q9BRT8 395 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 TCF7L1Q9HCS4 588 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 LYRM2Q9NU23 88 aaPredicted RBP6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 M0QZK8 103 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 TULP2O00295 520 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 GGCTO75223 188 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 OR5F1O95221 314 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 FKBP9O95302 570 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLC16A1P53985 500 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 CDH15P55291 814 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 KCNT1Q5JUK3 1230 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZNF529Q6P280 563 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 GADL1Q6ZQY3 521 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 FKBP9P1Q75LS8 142 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 CCNYL1Q8N7R7 359 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 ANKRD7Q92527 254 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 KAT2BQ92831 832 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLC41A3Q96GZ6 507 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 PCDHB12Q9Y5F1 795 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 ISPDA4D126 451 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 TRAPPC13A5PLN9 417 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 CDC7O00311 574 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 CTIFO43310 598 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 ENSAO43768 121 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 LRATO95237 230 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 SERPINA3P01011 423 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 GNAO1P09471 354 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 ARFIP1P53367 373 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZNHIT3Q15649 155 aaPredicted RBP6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 RELL2Q8NC24 303 aaPredicted RBP6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 TMEM35BQ8NCS4 154 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 TRPM4Q8TD43 1214 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZNF473Q8WTR7 871 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 SPATA16Q9BXB7 569 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 ADAM33Q9BZ11 813 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 WDR41Q9HAD4 459 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZNF222Q9UK12 451 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 MBD5Q9P267 1494 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 SCN9AQ15858 1988 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 CCNT1O60563 726 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 VAPBO95292 243 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 IFNGP01579 166 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 MSX1P28360 303 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 PWP1Q13610 501 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 FAM46CQ5VWP2 391 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 SMYD1Q8NB12 490 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 MOGAT1Q96PD6 335 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 CLCC1Q96S66 551 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 MTERF1Q99551 399 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 AGXT2Q9BYV1 514 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 IKZF3Q9UKT9 509 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 PRR12Q9ULL5 1215 aa6.15□□□□□ -1.42
CDC42BPA-201ENST00000334218 PCM1Q15154 2024 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 SAMD9LQ8IVG5 1584 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 LOC102724428A0A0B4J2F2 783 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 STX16O14662 325 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 PRPF3O43395 683 aaKnown RBP6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 NR1I2O75469 434 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 PPP3CBP16298 524 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 HTR2BP41595 481 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 DHPSP49366 369 aaPredicted RBP6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 VAMP7P51809 220 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 MAZP56270 477 aaKnown RBP6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 SIK1P57059 783 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 PSMA6P60900 246 aaKnown RBP6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 CDKL4Q5MAI5 379 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 ATG9BQ674R7 924 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 TBC1D21Q8IYX1 336 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 OR7G2Q8NG99 324 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 CRISPLD1Q9H336 500 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 REEP4Q9H6H4 257 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 VSX1Q9NZR4 365 aaPredicted RBP6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 ALPIP09923 528 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 MTFR2Q6P444 385 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 CYFIP1Q7L576 1253 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 OR8K5Q8NH50 307 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC7A6OSQ96CW6 309 aaPredicted RBP6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 FAR2Q96K12 515 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 ADPGKQ9BRR6 497 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 PARD6BQ9BYG5 372 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 SENP6Q9GZR1 1112 aaPredicted RBP6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 LATS2Q9NRM7 1088 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.15□□□□□ -1.433e-7■■■■□ 22.8
CDC42BPA-201ENST00000334218 GGT7Q9UJ14 662 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 ARHGEF12Q9NZN5 1544 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 MAST3O60307 1309 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 CCRL2O00421 344 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC28A2O43868 658 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 AIREO43918 545 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 SELENOFO60613 162 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 ACSL3O95573 720 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 ODC1P11926 461 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 ITGA2P17301 1181 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms