RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 FAM117BQ6P1L5 589 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 C4orf22Q6V702 233 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 VSIG10LQ86VR7 867 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 ARFGAP1Q8N6T3 406 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 TRAPPC12Q8WVT3 735 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 PGLYRP2Q96PD5 576 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 NTPCRQ9BSD7 190 aaKnown RBP12.09□□□□□ -0.47
LIMK2-202ENST00000333611 NRDE2Q9H7Z3 1164 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 SLC27A5Q9Y2P5 690 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 AP4S1Q9Y587 144 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 FAM149AA5PLN7 773 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 H0YCG3 227 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 IDH3BO43837 385 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 CCNT2O60583 730 aaKnown RBP12.08□□□□□ -0.48
LIMK2-202ENST00000333611 DAB1O75553 588 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 HMGCRP04035 888 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 ZNF23P17027 643 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 E2F2Q14209 437 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 NIPA1Q7RTP0 329 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 GOLM1Q8NBJ4 401 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 SLC44A1Q8WWI5 657 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 IGSF9Q9P2J2 1179 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 TMEM114B3SHH9 223 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 ASS1P00966 412 aaKnown RBP12.08□□□□□ -0.48
LIMK2-202ENST00000333611 CCDC159P0C7I6 412 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 CSH1P0DML2 217 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 CSH2P0DML3 217 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 IFI30P13284 250 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 TCF7P36402 384 aaPredicted RBP12.08□□□□□ -0.48
LIMK2-202ENST00000333611 CNTN2Q02246 1040 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 CLCQ05315 142 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 IL31Q6EBC2 164 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 CCDC81Q6ZN84 652 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 CADM3Q8N126 398 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 MPP5Q8N3R9 675 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 ZCCHC7Q8N3Z6 543 aaKnown RBP12.08□□□□□ -0.48
LIMK2-202ENST00000333611 PCDH20Q8N6Y1 951 aaKnown RBP12.08□□□□□ -0.48
LIMK2-202ENST00000333611 APPL2Q8NEU8 664 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 PMEPA1Q969W9 287 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 SPC25Q9HBM1 224 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 BOLA1Q9Y3E2 137 aa12.08□□□□□ -0.48
LIMK2-202ENST00000333611 TNFRSF10AO00220 468 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 AURKAO14965 403 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 SEMA3DO95025 777 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 CXCL8P10145 99 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 THOP1P52888 689 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 TGFB2P61812 414 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 SP2Q02086 613 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 CAPSQ13938 189 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 BTLAQ7Z6A9 289 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 C7orf31Q8N865 590 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 CATSPER1Q8NEC5 780 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 LRTOMTQ8WZ04 291 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 C17orf80Q9BSJ5 609 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 C20orf27Q9GZN8 174 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 IRF2BPLQ9H1B7 796 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 SMARCAD1Q9H4L7 1026 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 NOL11Q9H8H0 719 aaKnown RBP12.07□□□□□ -0.48
LIMK2-202ENST00000333611 C12orf4Q9NQ89 552 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 FAM49BQ9NUQ9 324 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 ZDHHC7Q9NXF8 308 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 RAB26Q9ULW5 256 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 ERVK-11Q9UQG0 969 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 PLOD2O00469 737 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 B4GALT5O43286 388 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 ASNA1O43681 348 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 BAIAP3O94812 1187 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 KLHL2O95198 593 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 ITGAXP20702 1163 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 YWHAEP62258 255 aaKnown RBP12.07□□□□□ -0.48
LIMK2-202ENST00000333611 PIWIL3Q7Z3Z3 882 aaKnown RBP12.07□□□□□ -0.48
LIMK2-202ENST00000333611 ZNF280CQ8ND82 737 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 RXFP2Q8WXD0 754 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 PIWIL1Q96J94 861 aaKnown RBP12.07□□□□□ -0.48
LIMK2-202ENST00000333611 MRIQ9BWK5 157 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 KLC2Q9H0B6 622 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 DNAJB4Q9UDY4 337 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 SCN9AQ15858 1988 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 ZNFX1Q9P2E3 1918 aaKnown RBP12.07□□□□□ -0.48
LIMK2-202ENST00000333611 APOC4-APOC2K7ER74 178 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 VWA5AO00534 786 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 APOC2P02655 101 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 AMHP03971 560 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 SUPT20HL2P0C7V6 817 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 TFE3P19532 575 aaPredicted RBP12.07□□□□□ -0.48
LIMK2-202ENST00000333611 ACADVLP49748 655 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 GTF2A2P52657 109 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 YWHAZP63104 245 aaKnown RBP12.07□□□□□ -0.48
LIMK2-202ENST00000333611 XIAPP98170 497 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 SLC25A11Q02978 314 aaKnown RBP12.07□□□□□ -0.48
LIMK2-202ENST00000333611 ADGRE1Q14246 886 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 FXNQ16595 210 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 PPP1R3AQ16821 1122 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 SUPT20HL1Q3ZLR7 823 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 SPDYE2Q495Y8 402 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 FASTKD1Q53R41 847 aaKnown RBP12.07□□□□□ -0.48
LIMK2-202ENST00000333611 DRICH1Q6PGQ1 229 aaPredicted RBP12.07□□□□□ -0.48
LIMK2-202ENST00000333611 BNC2Q6ZN30 1099 aaPredicted RBP12.07□□□□□ -0.48
LIMK2-202ENST00000333611 IGFN1Q86VF2 1251 aa12.07□□□□□ -0.48
LIMK2-202ENST00000333611 TNS4Q8IZW8 715 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms